hiruna72 / squigualiserLinks
Visualise and analyse nanopore (ONT) raw signals
☆117Updated this week
Alternatives and similar repositories for squigualiser
Users that are interested in squigualiser are comparing it to the libraries listed below
Sorting:
- Wally: Visualization of aligned sequencing reads and contigs☆118Updated 2 months ago
- Research release basecalling models and configurations☆113Updated last month
- Pipeline to convert a haploid assembly into diploid☆100Updated 5 months ago
- PBSIM3: a simulator for all types of PacBio and ONT long reads☆78Updated 2 months ago
- ☆40Updated this week
- Software for detecting regions of BrdU and EdU incorporation in Oxford Nanopore reads.☆31Updated 3 months ago
- ☆68Updated 5 months ago
- A list of software for pangenomics☆117Updated last month
- ☆78Updated 4 years ago
- Collection of tools for the analysis of CpG data☆85Updated 4 months ago
- Fast and accurate coordinate conversion between assemblies☆114Updated 3 months ago
- Read Until client library for Nanopore Sequencing☆104Updated 9 months ago
- A tool to identify, orient, trim and rescue full length cDNA reads☆82Updated 2 years ago
- Splitting of sequence reads by internal adapter sequence search☆51Updated 2 years ago
- Snakemake pipelines for nanopore sequencing data archiving and processing☆90Updated 3 years ago
- A short analysis of Oxford Nanopore consensus accuracy for bacterial genome assemblies☆59Updated 5 years ago
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆104Updated 4 months ago
- A local-haplotagging-based small and structural variant caller☆78Updated last month
- Panacus is a tool for computing statistics for GFA-formatted pangenome graphs☆110Updated last week
- Predictive kmer models for development use☆58Updated 2 years ago
- ☆48Updated 10 months ago
- List of genome assembly tools☆68Updated 3 weeks ago
- Variant calling tool for long-read sequencing data☆110Updated 3 months ago
- A *fast* tool for BAM/CRAM quality evaluation, intended for long reads☆152Updated 2 weeks ago
- Long-read mock community experiments☆105Updated 3 years ago
- Dfam Transposable Element Tools Docker container.☆93Updated last month
- Pangenome-based genome inference☆129Updated 2 months ago
- GUI for inspecting POD5 files☆30Updated 6 months ago
- ☆116Updated last month
- a tool for simulating nanopore raw signal data☆66Updated 9 months ago