skovaka / uncalled4
☆59Updated 4 months ago
Alternatives and similar repositories for uncalled4:
Users that are interested in uncalled4 are comparing it to the libraries listed below
- Visualise and analyse nanopore (ONT) raw signals☆115Updated 3 months ago
- Collection of tools for the analysis of CpG data☆81Updated 3 months ago
- Software for detecting regions of BrdU and EdU incorporation in Oxford Nanopore reads.☆31Updated last month
- ☆39Updated 3 weeks ago
- Research release basecalling models and configurations☆110Updated 10 months ago
- Wally: Visualization of aligned sequencing reads and contigs☆115Updated 3 weeks ago
- Fast and accurate coordinate conversion between assemblies☆112Updated last month
- PBSIM3: a simulator for all types of PacBio and ONT long reads☆74Updated 2 weeks ago
- ClairS - a deep-learning method for long-read somatic small variant calling☆83Updated 2 weeks ago
- Predictive kmer models for development use☆55Updated last year
- DNA 5mC methylation detection from Dorado or Guppy basecalled Oxford Nanopore reads☆50Updated 2 months ago
- DInoPORE: Direct detection of INOsines in native RNA with nanoPORE sequencing☆18Updated 2 years ago
- A local-haplotagging-based small and structural variant caller☆74Updated last week
- ☆46Updated 8 months ago
- Pipeline to convert a haploid assembly into diploid☆100Updated 3 months ago
- Variant calling tool for long-read sequencing data☆108Updated last month
- A complete diploid human genome☆117Updated 3 months ago
- A tool for somatic structural variant calling using long reads☆128Updated last week
- A tool to identify, orient, trim and rescue full length cDNA reads☆81Updated 2 years ago
- Toolkit for calling structural variants using short or long reads☆103Updated 2 weeks ago
- ☆110Updated this week
- Methylation Phasing for Nanopore Sequencing☆48Updated 2 years ago
- Splitting of sequence reads by internal adapter sequence search☆50Updated last year
- Reference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing☆56Updated last year
- ClairS-TO - a deep-learning method for tumor-only somatic variant calling☆60Updated last month
- a tool for inferring species tree from sequencing reads☆149Updated 2 months ago
- Phased assembly variant caller☆112Updated 5 months ago
- ☆91Updated 3 weeks ago
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆94Updated 2 months ago
- Evaluating genome assemblies☆88Updated last month