skovaka / uncalled4Links
☆78Updated 9 months ago
Alternatives and similar repositories for uncalled4
Users that are interested in uncalled4 are comparing it to the libraries listed below
Sorting:
- Visualise and analyse nanopore (ONT) raw signals☆122Updated last month
- a tool for simulating nanopore raw signal data☆70Updated last month
- A local-haplotagging-based small and structural variant caller☆87Updated 2 weeks ago
- ☆50Updated last month
- Software for detecting regions of BrdU and EdU incorporation in Oxford Nanopore reads.☆32Updated 2 weeks ago
- GUI for inspecting POD5 files☆33Updated 10 months ago
- Set of tools to manipulate and visualize modified base bam files☆57Updated 3 years ago
- Predictive kmer models for development use☆62Updated 2 years ago
- Splitting of sequence reads by internal adapter sequence search☆51Updated 2 years ago
- Research release basecalling models and configurations☆115Updated 5 months ago
- Wally: Visualization of aligned sequencing reads and contigs☆120Updated 3 weeks ago
- Reference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing☆59Updated last year
- PBSIM3: a simulator for all types of PacBio and ONT long reads☆84Updated 6 months ago
- ☆46Updated 2 weeks ago
- Fast and accurate coordinate conversion between assemblies☆117Updated 3 weeks ago
- Simple pileup-based variant caller☆93Updated 6 months ago
- A complete diploid human genome☆136Updated last month
- Copy number caller for long read data including SNV utilization☆68Updated 7 months ago
- Variant calling tool for long-read sequencing data☆112Updated 7 months ago
- Methylation Phasing for Nanopore Sequencing☆48Updated 2 years ago
- Pipeline to convert a haploid assembly into diploid☆105Updated 9 months ago
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆113Updated 3 months ago
- DNA 5mC methylation detection from Dorado or Guppy basecalled Oxford Nanopore reads☆54Updated 7 months ago
- ☆119Updated last week
- A list of software for pangenomics☆134Updated last week
- A program for assessing the T2T genome continuity☆88Updated 3 weeks ago
- Structural variant caller for real-time long-read sequencing data☆57Updated 2 years ago
- Error correction of ONT transcript reads☆58Updated 2 years ago
- PBSIM2: a simulator for long read sequencers with a novel generative model of quality scores☆73Updated 2 years ago
- TransposonUltimate - a holistic set of tools for transposon identification☆84Updated 3 years ago