nanoporetech / doradoLinks
Oxford Nanopore's Basecaller
☆685Updated 2 weeks ago
Alternatives and similar repositories for dorado
Users that are interested in dorado are comparing it to the libraries listed below
Sorting:
- De novo assembler for single molecule sequencing reads using repeat graphs☆846Updated last month
- Hifiasm: a haplotype-resolved assembler for accurate Hifi reads☆643Updated 3 months ago
- The next version of bwa-mem☆762Updated 10 months ago
- Sequence correction provided by ONT Research☆463Updated last month
- Structural variation caller using third generation sequencing☆598Updated this week
- A single molecule sequence assembler for genomes large and small.☆680Updated last month
- Plotting scripts for long read sequencing data☆482Updated last month
- Mummer alignment tool☆516Updated 4 months ago
- Tools for fast and flexible genome assembly scaffolding and improvement☆514Updated last year
- adapter trimmer for Oxford Nanopore reads☆365Updated last year
- Fast genome-wide functional annotation through orthology assignment☆628Updated last week
- Rapid & standardized annotation of bacterial genomes, MAGs & plasmids☆530Updated this week
- hybrid assembly pipeline for bacterial genomes☆601Updated 11 months ago
- Official home of genome aligner based upon notion of Cactus graphs☆582Updated 2 weeks ago
- Genome assembly evaluation tool☆441Updated 7 months ago
- ☆253Updated last year
- A PyTorch Basecaller for Oxford Nanopore Reads☆420Updated last week
- Fast and accurate de novo assembler for long reads☆388Updated last year
- BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eu…☆411Updated 5 months ago
- The second version of the Kraken taxonomic sequence classification system☆801Updated 2 weeks ago
- Transcript assembly and quantification for RNA-Seq☆447Updated this week
- RAxML Next Generation: faster, easier-to-use and more flexible☆428Updated last week
- Rapid prokaryotic genome annotation☆906Updated last year
- An accurate GFF3/GTF lift over pipeline☆487Updated last year
- Graph-based alignment (Hierarchical Graph FM index)☆502Updated 7 months ago
- GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more☆420Updated 6 months ago
- the pangenome graph builder☆437Updated 2 weeks ago
- Phylogenetic orthology inference for comparative genomics☆778Updated 8 months ago
- Data and analysis for NA12878 genome on nanopore☆392Updated 2 years ago
- quality filtering tool for long reads☆346Updated last year