Oxford Nanopore's Basecaller
☆813Feb 19, 2026Updated last month
Alternatives and similar repositories for dorado
Users that are interested in dorado are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A bioinformatics tool for working with modified bases☆259Jan 19, 2026Updated 2 months ago
- Pod5: a high performance file format for nanopore reads.☆173Mar 31, 2026Updated 2 weeks ago
- Methylation/modified base calling separated from basecalling.☆185Sep 17, 2024Updated last year
- Sequence correction provided by ONT Research☆504Updated this week
- HERRO is a highly-accurate, haplotype-aware, deep-learning tool for error correction of Nanopore R10.4.1 or R9.4.1 reads (read length of …☆242Feb 3, 2026Updated 2 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- A PyTorch Basecaller for Oxford Nanopore Reads☆430Feb 20, 2026Updated last month
- ☆51Mar 6, 2026Updated last month
- Visualise and analyse nanopore (ONT) raw signals☆129Dec 12, 2025Updated 4 months ago
- ☆249Apr 1, 2026Updated last week
- Plotting scripts for long read sequencing data☆541Mar 17, 2026Updated 3 weeks ago
- A versatile pairwise aligner for genomic and spliced nucleotide sequences☆2,153Feb 13, 2026Updated 2 months ago
- Signal-level algorithms for MinION data☆595Aug 5, 2023Updated 2 years ago
- De novo assembler for single molecule sequencing reads using repeat graphs☆912Apr 3, 2026Updated last week
- Ultra-fast methylation calling and event alignment tool for nanopore sequencing data (supports CUDA acceleration)☆163Mar 19, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Clair3 - Symphonizing pileup and full-alignment for deep learning-based long-read variant calling☆345Mar 26, 2026Updated 2 weeks ago
- Structural variation caller using third generation sequencing☆645Apr 2, 2026Updated last week
- Research release basecalling models and configurations☆117May 21, 2025Updated 10 months ago
- ☆82Jan 6, 2025Updated last year
- Slow5tools is a toolkit for converting (FAST5 <-> SLOW5), compressing, viewing, indexing and manipulating data in SLOW5 format.☆105Jan 28, 2026Updated 2 months ago
- quality filtering tool for long reads☆398Sep 17, 2025Updated 6 months ago
- Pipeline to convert a haploid assembly into diploid☆111Jan 23, 2025Updated last year
- ☆160Jan 22, 2026Updated 2 months ago
- A curated list of awesome nanopore analysis tools.☆308Jul 2, 2025Updated 9 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- a short-read polishing tool for long-read assemblies☆211Sep 19, 2025Updated 6 months ago
- adapter trimmer for Oxford Nanopore reads☆386May 8, 2024Updated last year
- Tools for plotting methylation data in various ways☆182Mar 24, 2026Updated 3 weeks ago
- DNA 5mC methylation detection from Dorado or Guppy basecalled Oxford Nanopore reads☆61Mar 5, 2025Updated last year
- Oxford Nanopore Technologies fast5 API software☆154Feb 27, 2024Updated 2 years ago
- A *fast* tool for BAM/CRAM quality evaluation, intended for long reads☆177Apr 1, 2026Updated last week
- lossless nanopore pod5 <=> s/blow5 file conversion☆47Feb 3, 2026Updated 2 months ago
- Splitting of sequence reads by internal adapter sequence search☆51May 30, 2023Updated 2 years ago
- Hifiasm: a haplotype-resolved assembler for accurate Hifi reads☆764Mar 18, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Megalodon is a research command line tool to extract high accuracy modified base and sequence variant calls from raw nanopore reads by a…☆204May 4, 2023Updated 2 years ago
- Nanopore demultiplexing, QC and alignment pipeline☆223Nov 20, 2025Updated 4 months ago
- CLI tool for flexible and fast adaptive sampling on ONT sequencers☆195Feb 25, 2026Updated last month
- Telomere-to-telomere assembly of accurate long reads (PacBio HiFi, Oxford Nanopore Duplex, HERRO corrected Oxford Nanopore Simplex) and O…☆387Mar 11, 2026Updated last month
- A tool for generating consensus long-read assemblies for bacterial genomes☆225Updated this week
- The buttery eel - a slow5 guppy/dorado basecaller wrapper☆43Feb 13, 2026Updated 2 months ago
- Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads☆239Dec 29, 2023Updated 2 years ago