The buttery eel - a slow5 guppy/dorado basecaller wrapper
☆45Feb 13, 2026Updated 8 months ago
Alternatives and similar repositories for buttery-eel
Users that are interested in buttery-eel are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A simple toolkit for manipulating nanopore signal data☆20Mar 14, 2026Updated 7 months ago
- lossless nanopore pod5 <=> s/blow5 file conversion☆51Aug 26, 2026Updated 2 months ago
- A bioinformatics tool for viewing and calculating base modification frequencies from BAM files☆46Oct 11, 2026Updated 3 weeks ago
- Slow5tools is a toolkit for converting (FAST5 <-> SLOW5), compressing, viewing, indexing and manipulating data in SLOW5 format.☆107Aug 26, 2026Updated 2 months ago
- Visualise and analyse nanopore (ONT) raw signals☆130Jun 11, 2026Updated 4 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Ultra-fast methylation calling and event alignment tool for nanopore sequencing data (supports CUDA acceleration)☆166Aug 21, 2026Updated 2 months ago
- A simplified version of Dorado built on top of S/BLOW5 format.☆42Updated this week
- a tool for simulating nanopore raw signal data☆83Mar 4, 2026Updated 8 months ago
- A library and tool for accessing remote BLOW5 files.☆25Jun 3, 2026Updated 5 months ago
- Realtime base modification frequency tool☆15Sep 16, 2025Updated last year
- SquiggleKit: A toolkit for manipulating nanopore signal data☆130Feb 16, 2024Updated 2 years ago
- slow5lib is a software library for reading & writing SLOW5 files.☆49Aug 24, 2026Updated 2 months ago
- A streaming method for mapping nanopore raw signals☆32Nov 7, 2021Updated 4 years ago
- GPU CRF-CTC decoding for nanopore basecalling☆16Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- InterARTIC - An interactive local web application for viral whole genome sequencing utilising the artic network pipelines..☆31Dec 27, 2023Updated 2 years ago
- ☆85Jan 6, 2025Updated last year
- NanoReviser: An Error-correction Tool for Nanopore Sequencing Based on a Deep Learning Algorithm☆27May 9, 2024Updated 2 years ago
- Wrapper to read fast5, slow5, blow5 and pod5 files.☆13Mar 26, 2025Updated last year
- Fast and scalable nanopore adaptive sampling☆37Jun 6, 2023Updated 3 years ago
- "nanoCEM" is a simple tool designed to visualize the features that distinguish between two groups of ONT data at the site level.☆18Oct 13, 2025Updated last year
- Oxford Nanopore's Basecaller☆883Sep 3, 2026Updated 2 months ago
- Low level bindings and wrapper for slow5lib, an alternative for ONT Nanopore sequencing FAST5 output☆10Nov 5, 2024Updated last year
- Minotour API, web and client code☆30Mar 28, 2026Updated 7 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis☆20Nov 18, 2022Updated 3 years ago
- Nanopore sequence read simulator☆313Mar 12, 2026Updated 7 months ago
- Correcting errors in noisy long reads using variation graphs☆53Nov 17, 2022Updated 3 years ago
- RawHash can accurately and efficiently map raw nanopore signals to reference genomes of varying sizes (e.g., from viral to a human genome…☆70Jan 1, 2026Updated 10 months ago
- ☆22Updated this week
- Methylation/modified base calling separated from basecalling.☆189Sep 17, 2024Updated 2 years ago
- A small bash script that automates sweeping Guppy parameters in an attempt to optimise basecalling rate☆30Apr 20, 2022Updated 4 years ago
- Functions to extract information from Oxford Nanopore sequencing data and alignments☆12Sep 28, 2026Updated last month
- DeepSelecNet is an enhanced deep learning model to perform read classification for selective sequencing.☆18Mar 5, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Signal based nanopore RNA demultiplexing with convolutional neural networks☆40Aug 2, 2024Updated 2 years ago
- Alignment-based filtering CLI tool☆63Oct 31, 2025Updated last year
- Predictive kmer models for development use☆64Jun 6, 2023Updated 3 years ago
- Hybrid error correction of long reads using colored de Bruijn graphs☆109Jan 17, 2026Updated 9 months ago
- Generate random test data for bioinformatics☆27Jun 17, 2024Updated 2 years ago
- Graph-based assembly phasing☆102Nov 25, 2025Updated 11 months ago
- CLI tool for flexible and fast adaptive sampling on ONT sequencers☆199Updated this week