Psy-Fer / buttery-eel
The buttery eel - a slow5 guppy/dorado basecaller wrapper
☆39Updated last week
Alternatives and similar repositories for buttery-eel:
Users that are interested in buttery-eel are comparing it to the libraries listed below
- crab go snap snap☆37Updated last month
- Pan-Genomic Matching Statistics☆52Updated 11 months ago
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆33Updated last year
- GUI for inspecting POD5 files☆26Updated 3 months ago
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- Splitting of sequence reads by internal adapter sequence search☆51Updated last year
- catalog for long-read sequencing tools☆32Updated 2 years ago
- ☆27Updated last month
- DNA methylation analysis downstream to Nanopolish for Oxford Nanopore DNA sequencing datasets☆34Updated 4 years ago
- A small bash script that automates sweeping Guppy parameters in an attempt to optimise basecalling rate☆30Updated 2 years ago
- Error correction of ONT transcript reads☆59Updated last year
- A snakemake pipeline to assembly, polishing, correction and quality check from Oxford nanopore reads.☆36Updated last year
- Fast and scalable nanopore adaptive sampling☆33Updated last year
- Remove lambda phage reads from a fastq file☆29Updated 2 years ago
- Set of tools to manipulate and visualize modified base bam files☆52Updated 2 years ago
- Correcting errors in noisy long reads using variation graphs☆51Updated 2 years ago
- WDL workflows for variant calling and assembly using ONT☆33Updated this week
- An accurate and ultra-fast adapter and quality trimming program for Illumina Next-Generation Sequencing (NGS) data.☆35Updated last week
- Scalable long read self-correction and assembly polishing with multiple sequence alignment☆55Updated last year
- A Nextflow workflow to generate lift over files for any pair of genomes☆64Updated last month
- In-depth characterization and annotation of differences between two sets of DNA sequences☆60Updated 4 years ago
- Simple pileup-based variant caller☆88Updated last month
- ☆61Updated last week
- A program for assessing the T2T genome continuity☆70Updated 3 weeks ago
- A versatile pairwise aligner for genomic and spliced nucleotide sequences☆52Updated 9 months ago
- Improved Phased Assembler☆28Updated 3 years ago
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆48Updated 2 weeks ago
- Adapter trimmer for Oxford Nanopore reads using ab initio method☆40Updated 4 months ago
- ☆77Updated 3 weeks ago
- VACmap: a long-read aligner specifically designed for complex structural variation discovery☆34Updated 4 months ago