BonsonW / slow5curl
A library and tool for accessing remote BLOW5 files.
☆24Updated last month
Related projects ⓘ
Alternatives and complementary repositories for slow5curl
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 4 years ago
- ☆40Updated this week
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆24Updated last year
- The buttery eel - a slow5 guppy/dorado basecaller wrapper☆34Updated 2 weeks ago
- URMAP ultra-fast read mapper☆39Updated 4 years ago
- LongcallR is a small variant caller for single molecule long-read RNA-seq data☆41Updated last month
- Implementation of ToL genome assembly workflows☆20Updated last week
- A python tool box for fast and accurate quality control, conversion and alignment of nanopore sequencing data☆20Updated 2 years ago
- create a interactive coverage plot dashboard from bam files and add gb, vcf and bed tracks☆38Updated 3 months ago
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆48Updated last month
- MarginPolish: Graph based assembly polishing☆45Updated 4 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆59Updated 4 years ago
- Find Unique genomic Regions☆29Updated this week
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆42Updated last month
- This is a library C/Python/CLI for working with TAF (.taf,.taf.gz) and MAF (.maf) alignment files☆24Updated last week
- De novo construction of isoforms from long-read data☆18Updated this week
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆34Updated 3 weeks ago
- ☆29Updated 2 years ago
- Improved Phased Assembler☆28Updated 2 years ago
- crab go snap snap☆33Updated last week
- Tumour-only somatic mutation calling using long reads☆24Updated 3 weeks ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆54Updated last week
- Minor Variant Calling and Phasing Tools☆15Updated 2 years ago
- Methylmap is a tool for visualization of modified nucleotide frequencies for large cohort sizes.☆18Updated last week
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆24Updated 6 months ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆30Updated 2 years ago
- Pan-Genomic Matching Statistics☆48Updated 7 months ago
- Panache is a web-based interface designed for the visualization of linearized pangenomes. It can be used to show presence/absence informa…☆44Updated last year
- Complex structural variant visualization for HiFi sequencing data☆26Updated this week