BonsonW / slow5curl
A library and tool for accessing remote BLOW5 files.
☆24Updated 4 months ago
Alternatives and similar repositories for slow5curl:
Users that are interested in slow5curl are comparing it to the libraries listed below
- crab go snap snap☆37Updated 2 weeks ago
- a lexicographically-based GTF/GFF sorter☆32Updated 6 months ago
- The buttery eel - a slow5 guppy/dorado basecaller wrapper☆38Updated last week
- Tumour-only somatic mutation calling using long reads☆26Updated 3 months ago
- Automated Detection and Qualification of Differential Methylation☆11Updated last year
- ☆41Updated 3 months ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- vembrane filters VCF records using python expressions☆58Updated 4 months ago
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆24Updated last year
- Immuological gene typing and annotation for genome assembly☆31Updated 4 months ago
- URMAP ultra-fast read mapper☆38Updated 4 years ago
- curPrimers is a tool for trimming primer sequences from amplicon based NGS reads☆17Updated 5 years ago
- This is a library C/Python/CLI for working with TAF (.taf,.taf.gz) and MAF (.maf) alignment files☆25Updated 2 months ago
- Fast sequencing data quality metrics☆23Updated last week
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆30Updated 3 years ago
- A tool to extract LOH blocks from VCF, BAM and FASTA data☆21Updated 5 months ago
- LongcallR is a small variant caller for single molecule long-read RNA-seq data☆44Updated 4 months ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆56Updated last week
- Population-wide Deletion Calling☆35Updated 5 months ago
- DNA methylation analysis downstream to Nanopolish for Oxford Nanopore DNA sequencing datasets☆34Updated 3 years ago
- ☆16Updated last month
- ☆20Updated 2 years ago
- Structural variant (SV) analysis tools☆35Updated 7 months ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆47Updated 5 years ago
- Fast and scalable nanopore adaptive sampling☆33Updated last year
- A bioinformatics pipeline to phase and impute genetic data☆19Updated this week
- In-depth characterization and annotation of differences between two sets of DNA sequences☆60Updated 4 years ago
- Lightweight mosaic/somatic SV caller for long reads (WIP)☆29Updated 2 months ago
- A tutorial on structural variant calling for short read sequencing data☆27Updated 3 months ago
- Location of public benchmarking; primarily final results☆18Updated this week