tleonardi / nanocomporeLinks
RNA modifications detection from Nanopore dRNA-Seq data
☆83Updated 2 weeks ago
Alternatives and similar repositories for nanocompore
Users that are interested in nanocompore are comparing it to the libraries listed below
Sorting:
- A tool to identify, orient, trim and rescue full length cDNA reads☆82Updated 2 years ago
- Meta-pipeline to identify transposable element insertions using next generation sequencing data☆99Updated last week
- Research release basecalling models and configurations☆110Updated 2 weeks ago
- Long read aligner☆115Updated 2 years ago
- Fast and accurate coordinate conversion between assemblies☆113Updated 2 months ago
- LongQC is a tool for the data quality control of the PacBio and ONT long reads.☆167Updated last year
- Plotting tools for nanopore methylation data☆93Updated last year
- Nextflow pipeline for analysis of direct RNA Nanopore reads☆103Updated last month
- Tools to annotate genomes using long read transcriptomics data☆45Updated 4 years ago
- A *fast* tool for BAM/CRAM quality evaluation, intended for long reads☆151Updated 2 months ago
- Comparison of multiple long read datasets☆132Updated 3 weeks ago
- GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/n…☆67Updated 2 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆67Updated 3 weeks ago
- ☆48Updated 6 months ago
- GenMap - Fast and Exact Computation of Genome Mappability☆107Updated 11 months ago
- Wally: Visualization of aligned sequencing reads and contigs☆117Updated last month
- ☆94Updated 3 weeks ago
- Structural Variant Identification Method using Genome Assemblies☆117Updated 2 years ago
- Snakemake pipelines for nanopore sequencing data archiving and processing☆90Updated 3 years ago
- cDNA read preprocessing☆71Updated 10 months ago
- ☆112Updated last month
- Quality control tools for nanopore sequencing data☆107Updated 7 months ago
- reference-free transcriptome assembly for short and long reads☆105Updated last year
- Hybrid error correction of long reads using colored de Bruijn graphs☆100Updated 8 months ago
- Visualise and analyse nanopore (ONT) raw signals☆116Updated 4 months ago
- Tools for the analysis of structural variation in genomes☆79Updated last year
- A tool for somatic structural variant calling using long reads☆134Updated last month
- A genomic k-mer counter (and sequence utility) with nice features.☆137Updated 3 months ago
- Dfam Transposable Element Tools Docker container.☆92Updated last month
- SV caller for nanopore data☆91Updated 4 years ago