tleonardi / nanocomporeLinks
RNA modifications detection from Nanopore dRNA-Seq data
☆87Updated 3 weeks ago
Alternatives and similar repositories for nanocompore
Users that are interested in nanocompore are comparing it to the libraries listed below
Sorting:
- Research release basecalling models and configurations☆115Updated 4 months ago
- Meta-pipeline to identify transposable element insertions using next generation sequencing data☆104Updated 4 months ago
- Plotting tools for nanopore methylation data☆93Updated 2 months ago
- A tool to identify, orient, trim and rescue full length cDNA reads☆82Updated 3 years ago
- Tools to annotate genomes using long read transcriptomics data☆46Updated 4 years ago
- ☆49Updated last week
- Wally: Visualization of aligned sequencing reads and contigs☆118Updated 5 months ago
- Snakemake pipelines for nanopore sequencing data archiving and processing☆91Updated 3 years ago
- GenMap - Fast and Exact Computation of Genome Mappability☆113Updated last year
- Variant calling tool for long-read sequencing data☆112Updated 6 months ago
- Toolkit for calling structural variants using short or long reads☆109Updated last week
- Methylation Phasing for Nanopore Sequencing☆48Updated 2 years ago
- Long read aligner☆115Updated 2 years ago
- ☆46Updated this week
- Visualise and analyse nanopore (ONT) raw signals☆121Updated last month
- Nextflow pipeline for analysis of direct RNA Nanopore reads☆108Updated 3 months ago
- A post sequencing QC tool for Oxford Nanopore sequencers☆103Updated 2 months ago
- reference-free transcriptome assembly for short and long reads☆109Updated last year
- Mikado is a lightweight Python3 pipeline whose purpose is to facilitate the identification of expressed loci from RNA-Seq data * and to s…☆102Updated 8 months ago
- ☆76Updated 9 months ago
- Lima - Demultiplex Barcoded PacBio Samples☆67Updated 4 months ago
- ☆79Updated 4 years ago
- Tools for plotting methylation data in various ways☆160Updated this week
- Reference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing☆59Updated last year
- Somatic structural variant caller for long-read data☆80Updated last week
- Fast and accurate coordinate conversion between assemblies☆116Updated 2 weeks ago
- Tandem repeat genotyping and visualization from PacBio HiFi data☆125Updated 2 months ago
- Tools for the analysis of structural variation in genomes☆81Updated last year
- ☆49Updated 11 months ago
- Software for detecting regions of BrdU and EdU incorporation in Oxford Nanopore reads.☆32Updated last month