Teichlab / Genes2GenesLinks
Aligning gene expression trajectories of single-cell reference and query systems
☆80Updated 5 months ago
Alternatives and similar repositories for Genes2Genes
Users that are interested in Genes2Genes are comparing it to the libraries listed below
Sorting:
- Functional Inference of Gene Regulation☆49Updated last year
- R package for pathway analysis in scRNA-seq data☆77Updated last year
- Functions for single cell data analysis☆32Updated 4 years ago
- Estimation of Single-Cell Potency with Single Cell Entropy☆43Updated 2 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆36Updated 2 months ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated last year
- ☆61Updated last month
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆26Updated last year
- R package for decontaminating the spot swapping effect and recovering true expression in spatial transcriptomics data☆34Updated last year
- ☆41Updated 4 years ago
- R package for Protein activity analysis of single-cell RNAseq.☆85Updated 3 years ago
- Single cell RNA-seq analysis bundle☆37Updated 6 years ago
- ☆50Updated 5 years ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated last year
- Accurate and fast cell marker gene identification with COSG☆54Updated 3 weeks ago
- Methods for decontamination of single cell data☆54Updated 10 months ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆94Updated 7 months ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆91Updated 3 weeks ago
- Niche Interactions and Cellular Heterogeneity in Extracellular Signaling☆57Updated last month
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 5 years ago
- Analysis of cell-cell communication at single-cell resolution☆105Updated last year
- A python-based package and software to predict metabolite mediated cell-cell communications by single-cell RNA-seq data☆78Updated 5 months ago
- Unsupervised Inference of Developmental Directions for Single Cells☆22Updated 2 years ago
- ☆61Updated 4 months ago
- Code used to create the core and extended GBmap, including downstream analyses (cell-cell interactions, spatial transcriptomics deconvolu…☆65Updated 3 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆114Updated 8 months ago
- Single-Cell Analysis of Inter-Individual Variability by Interpretable Tensor Decomposition☆62Updated last year
- ☆32Updated 3 years ago
- An R package performing object conversion from ArchRProject (ArchR) to Signac SeuratObject (Signac)☆37Updated last year
- ☆56Updated last year