Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights in single-cell perturbation datasets.
☆17Apr 20, 2024Updated 2 years ago
Alternatives and similar repositories for PS
Users that are interested in PS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A computational tool for identification of 3D multi-modal spatial neighborhoods☆15Aug 1, 2025Updated 10 months ago
- scMODAL: A general deep learning framework for single-cell Multi-Omics Data Alignment with feature Links☆23Jun 10, 2025Updated last year
- ☆28Mar 12, 2026Updated 3 months ago
- Code for spatial subclone paper☆18Jan 23, 2025Updated last year
- Publically accessible code for DIISCO method☆13Oct 15, 2025Updated 8 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆17Jul 8, 2024Updated last year
- ☆15Feb 12, 2026Updated 4 months ago
- ☆40Jun 24, 2025Updated last year
- Aligning gene expression trajectories of single-cell reference and query systems☆89Aug 10, 2025Updated 10 months ago
- Scripts and notebooks to reproduce all analysis from Massoni-Badosa et al. (2022)☆36Jan 8, 2025Updated last year
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆20May 13, 2026Updated last month
- Phenotype Associated Spatial Signature Analysis with Graph-based Embedding☆26Mar 5, 2025Updated last year
- Implementation of CellNEST method☆69Jun 23, 2026Updated last week
- Single-Cell Inference of Class Switch Recombination☆23Jun 19, 2026Updated last week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆13Apr 4, 2023Updated 3 years ago
- Functional Annotation for Single-Cell Transcriptomics☆12Jun 29, 2024Updated 2 years ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Feb 22, 2025Updated last year
- ☆12Jun 11, 2023Updated 3 years ago
- Drug Response Estimation from single-cell Expression Profiles☆13Jan 5, 2024Updated 2 years ago
- ☆68Apr 22, 2026Updated 2 months ago
- Integrating temporal gene expression modalities for trajectory inference and disease prediction☆11Sep 20, 2022Updated 3 years ago
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆22Oct 8, 2025Updated 8 months ago
- ☆11Apr 25, 2026Updated 2 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆138Feb 13, 2025Updated last year
- ☆46May 4, 2024Updated 2 years ago
- ☆12Apr 6, 2022Updated 4 years ago
- Paired Insertion Counting for snATAC-seq data☆19Mar 15, 2026Updated 3 months ago
- ☆15Oct 24, 2025Updated 8 months ago
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Sep 17, 2024Updated last year
- ☆19Apr 16, 2026Updated 2 months ago
- Construction of a 3D whole organism spatial atlas by joint modeling of multiple slices☆71Nov 20, 2023Updated 2 years ago
- SegmenTation Analysis by ParaLlelization of 3D Datasets☆12Feb 22, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆16Sep 29, 2023Updated 2 years ago
- UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations.☆58Jun 23, 2026Updated last week
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆33Jan 30, 2026Updated 5 months ago
- Test genes for Spatial Variation☆15Dec 20, 2024Updated last year
- Reproducibility Repo for mvTCR paper☆13Apr 2, 2024Updated 2 years ago
- Library for managing, storage, viewing, and working with spatial transcriptomics data using Imglib2, N5, BigDataViewer and Fiji.☆32May 27, 2025Updated last year
- Extensible pipeline tool for processing optical pooled screens data.☆26Updated this week