Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA
☆87Apr 21, 2025Updated last year
Alternatives and similar repositories for SCENT
Users that are interested in SCENT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆68Apr 22, 2026Updated 2 months ago
- cell type specific, trait-associated gene regulation☆30Mar 31, 2025Updated last year
- Aligning gene expression trajectories of single-cell reference and query systems☆89Aug 10, 2025Updated 10 months ago
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Jan 11, 2025Updated last year
- GWAS genetics Fine-mapping method☆27Jun 11, 2026Updated 2 weeks ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Functional Inference of Gene Regulation☆54Jul 5, 2024Updated last year
- ☆67Sep 13, 2024Updated last year
- single-cell Contamination Detection and Correction☆18Jan 15, 2025Updated last year
- ☆130Jun 23, 2026Updated last week
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆22Oct 8, 2025Updated 8 months ago
- identifying disease critical cell types and programs from single cell RNAseq☆61May 30, 2022Updated 4 years ago
- ☆10Jan 15, 2020Updated 6 years ago
- GWAS genetics Fine-mapping method☆18May 17, 2024Updated 2 years ago
- Gene Set + S2G strategy annotations analyzed for disease architecture☆61Nov 18, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A single-cell analysis toolkit to jointly analyze samples from distinct conditions☆37Apr 2, 2025Updated last year
- Learning meaningful representations of genes☆21Jul 7, 2025Updated 11 months ago
- R and MATLAB scripts for MAGICAL☆12Jun 26, 2024Updated 2 years ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆22Mar 25, 2026Updated 3 months ago
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆29Sep 20, 2022Updated 3 years ago
- Repository to store code used for the analyses presented in "Defining the Regulatory Logic of Breast Cancer Using Single-Cell Epigenetic …☆21May 17, 2025Updated last year
- Context specific and dynamic gene regulatory network reconstruction and analysis☆128Jun 22, 2026Updated last week
- Single-cell disease relevance score (scDRS)☆191Updated this week
- ☆12Jun 11, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆22Apr 30, 2025Updated last year
- SCENIC+ is a python package to build gene regulatory networks (GRNs) using combined or separate single-cell gene expression (scRNA-seq) a…☆260Jan 16, 2026Updated 5 months ago
- Colocalization analysis of genetic association signals☆59Jun 13, 2025Updated last year
- ☆36Apr 11, 2025Updated last year
- Open4Gene, A Hurdle Model-based Method for Peak-to-Gene Linkage Analysis☆17Mar 17, 2026Updated 3 months ago
- An R package performing object conversion from ArchRProject (ArchR) to Signac SeuratObject (Signac)☆39Aug 22, 2024Updated last year
- Pipeline to run scE2G☆44Apr 17, 2026Updated 2 months ago
- ☆24May 9, 2026Updated last month
- Single Cell Analysis of Five'Ends☆52Mar 19, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Code used to analyze single cell RNA and ATAC sequencing in developing human brain☆36Jan 4, 2022Updated 4 years ago
- LDlinkR☆64Jun 22, 2026Updated last week
- ☆18May 12, 2023Updated 3 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆32Dec 3, 2024Updated last year
- ☆16Sep 1, 2023Updated 2 years ago
- R package for generalized binary covariance decomposition.☆16Jul 13, 2025Updated 11 months ago
- scGRO-seq analyses codes☆13Jan 9, 2024Updated 2 years ago