xushiabbvie / TDtoolLinks
☆11Updated 11 months ago
Alternatives and similar repositories for TDtool
Users that are interested in TDtool are comparing it to the libraries listed below
Sorting:
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated 2 weeks ago
- Code used to process the data of the HBCA project☆32Updated last year
- ☆58Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq data☆27Updated 3 years ago
- ☆16Updated 4 years ago
- A record of the analysis pipelines used to create the HTAPP data☆33Updated 5 months ago
- ☆32Updated 4 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆36Updated 5 months ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆13Updated 2 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 10 months ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- ☆48Updated last year
- ☆37Updated 3 years ago
- ☆15Updated 4 years ago
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆31Updated 2 years ago
- Code to reproduce TNBC analysis and figures☆24Updated 3 years ago
- ☆20Updated 3 years ago
- Implements *CellAnnotator (aka *CAT/starCAT), annotating scRNA-Seq with predefined gene expression programs☆56Updated this week
- Single-cell Mutual Information-based Network Engineering Ranger☆20Updated 3 weeks ago
- SCassist : An AI Based Workflow Assistant for Single-Cell Analysis☆28Updated 3 weeks ago
- ☆17Updated last year
- A robust and accurate cell type classifier for single cell RNA-seq data☆17Updated 2 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆31Updated 2 years ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆33Updated 3 months ago
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- ☆39Updated 4 years ago
- Pseudotime Analysis for Bulk Data☆16Updated last year
- ☆19Updated 4 months ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated last year
- Identify cell type based on cell markers for single cell squencing☆11Updated last year