yutongo / TIGON
☆40Updated last month
Alternatives and similar repositories for TIGON
Users that are interested in TIGON are comparing it to the libraries listed below
Sorting:
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆24Updated 6 months ago
- scNODE: Generative Model for Temporal Single Cell Transcriptomic Data Prediction☆19Updated 7 months ago
- A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative mod…☆23Updated last month
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆43Updated last year
- ☆43Updated last year
- ☆39Updated this week
- Co-accessibility network from single-cell ATAC-seq data. Python code, based on Cicero package (R).☆21Updated last month
- R implementation of GeneTrajectory☆58Updated last year
- Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq☆13Updated last year
- an integrative algorithm to distinguish spatially variable cell subclusters by reconstructing cells onto a pseudo space with spatial tran…☆22Updated last year
- ☆45Updated 2 years ago
- Collection of computational tools for cell-cell communication inference for single-cell and spatially resolved omics☆48Updated this week
- ☆48Updated last month
- PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.☆28Updated last year
- inferring regulatory cellular dynamics☆41Updated last week
- Python implementation of Gene Trajectory☆25Updated 8 months ago
- ☆42Updated last week
- ☆24Updated last year
- Gene group activity utility functions for Scanpy☆74Updated 4 months ago
- Additional code and analysis from the single-cell integration benchmarking project☆63Updated 2 years ago
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆40Updated 4 months ago
- Single cell omics biology annotations☆51Updated 3 weeks ago
- ☆47Updated last year
- Predict RNA velocity through deep learning☆69Updated last year
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆30Updated last year
- Tools for sgRNA calling in direct capture Perturb-seq data☆33Updated last year
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆34Updated 10 months ago
- A set of files to do genomics analysis on python☆18Updated 5 months ago
- cTPnet Package☆25Updated 2 years ago
- Probabilistic Alignment of Spatial Transcriptomics Experiments v.2☆34Updated 2 months ago