KrishnaswamyLab / Gene-Signal-Pattern-AnalysisLinks
Learning meaningful representations of genes
☆19Updated 3 months ago
Alternatives and similar repositories for Gene-Signal-Pattern-Analysis
Users that are interested in Gene-Signal-Pattern-Analysis are comparing it to the libraries listed below
Sorting:
- ☆17Updated 6 months ago
- A single-cell analysis toolkit to jointly analyze samples from distinct conditions☆33Updated 6 months ago
- ☆56Updated last year
- Learning motif contributions to cell transitions using sequence features and graphs.☆28Updated last year
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆17Updated last year
- ☆13Updated 9 months ago
- ☆16Updated last year
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆11Updated last year
- Unsupervised cell functional annotation for single-cell RNA-Seq☆22Updated 2 years ago
- ☆61Updated last year
- ☆16Updated 2 months ago
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Updated last year
- Code and example of the D-SPIN framework☆24Updated 2 weeks ago
- ☆40Updated this week
- CellDrift: temporal perturbation effects for single cell data☆13Updated 2 years ago
- ☆17Updated last year
- Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data☆33Updated this week
- Matilda is a multi-task framework for learning from single-cell multimodal omics data. Matilda leverages the information from the multi-m…☆21Updated 4 months ago
- Gene regulatory network inference for RNA velocity and pseudotime data☆27Updated last month
- ☆50Updated 3 weeks ago
- cTPnet Package☆26Updated 3 years ago
- ☆24Updated 6 months ago
- MARIO: single-cell proteomic data matching and integration using both shared and distinct features☆22Updated 2 years ago
- ☆11Updated 2 years ago
- scPRAM accurately predicts single-cell gene expression perturbation response based on attention mechanism☆15Updated last year
- ACTIONet single-cell analysis framework☆42Updated last year
- ☆15Updated 4 months ago
- Python code for cross-condition label refinement in single-cell data with HiDDEN☆14Updated last year
- ☆13Updated last month
- Integrating temporal gene expression modalities for trajectory inference and disease prediction☆10Updated 3 years ago