KrishnaswamyLab / Gene-Signal-Pattern-AnalysisLinks
Learning meaningful representations of genes
☆19Updated 8 months ago
Alternatives and similar repositories for Gene-Signal-Pattern-Analysis
Users that are interested in Gene-Signal-Pattern-Analysis are comparing it to the libraries listed below
Sorting:
- ☆16Updated last month
- Code and example of the D-SPIN framework☆22Updated 2 weeks ago
- GIANT (Gene-based data Integration and ANalysis Technique) is a method for large-scale joint analyses of atlas-level single cell data.☆12Updated 2 years ago
- A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data☆13Updated 8 months ago
- ☆16Updated 11 months ago
- ☆59Updated 9 months ago
- Learning motif contributions to cell transitions using sequence features and graphs.☆28Updated 9 months ago
- ☆26Updated last year
- Spatial reconstruction of dissociated single-cell data☆18Updated last year
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Updated 9 months ago
- scPRAM accurately predicts single-cell gene expression perturbation response based on attention mechanism☆14Updated 8 months ago
- ☆31Updated 2 months ago
- ☆14Updated 2 years ago
- Matilda is a multi-task framework for learning from single-cell multimodal omics data. Matilda leverages the information from the multi-m…☆21Updated 3 weeks ago
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆24Updated 8 months ago
- CellDrift: temporal perturbation effects for single cell data☆13Updated 2 years ago
- ☆14Updated this week
- A single-cell analysis toolkit to jointly analyze samples from distinct conditions☆30Updated 2 months ago
- ☆13Updated 5 months ago
- ACTIONet single-cell analysis framework☆41Updated 9 months ago
- A modular tool for proportion analysis in single-cell sequencing data☆22Updated last month
- Python code for cross-condition label refinement in single-cell data with HiDDEN☆12Updated 9 months ago
- Code, data and analysis for moslin.☆12Updated 8 months ago
- R package for transfer learning of single-cell RNA-seq denoising☆30Updated 3 years ago
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆14Updated last year
- Methods for visualization and analysis of spatially-resolved gene expression☆20Updated 3 weeks ago
- Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data☆31Updated 3 months ago
- ☆27Updated last week
- Spatial direct messaging detected by bivariate Moran☆27Updated last month
- Code used to analyze single cell RNA and ATAC sequencing in developing human brain☆33Updated 3 years ago