Alternatives and similar repositories for Human-Endometrial-Cell-Atlas_HECA

Users that are interested in Human-Endometrial-Cell-Atlas_HECA are comparing it to the libraries listed below

• MarioniLab / hbca
  Code used to process the data of the HBCA project
  ☆32Updated last year
• jig4003 / Ragas
  R tools for analysis and visualization of single-cell subclustering data
  ☆17Updated 2 months ago
• YangJAT / HCA
  Hierarchical Cell Annotation
  ☆26Updated 11 months ago
• compbioNJU / CellFunTopic
  Functional Annotation for Single-Cell Transcriptomics
  ☆11Updated last year
• YuLab-SMU / tigeR
  🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package
  ☆34Updated 5 months ago
• CICAMS-Liu-lab / ECGEA
  ☆16Updated 4 years ago
• PaulingLiu / metaICB
  ☆22Updated 2 years ago
• wuaipinglab / scImmuCC
  Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.
  ☆10Updated last year
• dpeerlab / progressive-plasticity-crc-metastasis
  Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"
  ☆16Updated 11 months ago
• zgyaru / anti-PD1_ESCC
  ☆17Updated 2 years ago
• phillipnicol / scDist
  Robust identification of perturbed cell types in single-cell RNA-seq data
  ☆34Updated this week
• AndersonHu85 / ccRCC_multiomics
  ☆17Updated 2 years ago
• miccec / yaGST
  ☆13Updated 8 years ago
• zwj-tina / neoadjuvant-treatment-of-NSCLC
  ☆25Updated 10 months ago
• cbib / Seurat-Integrate
  R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…
  ☆31Updated 2 months ago
• jinworks / scAB
  scAB detects multiresolution cell states with clinical significance
  ☆19Updated 3 years ago
• zdq0808 / TMEscore
  Calculating Tumor microenvironment score
  ☆29Updated 2 years ago
• JerryZhang-1222 / starTracer
  A High Effect Marker Gene Search Tool for Single-cell RNA-seq Analysis
  ☆32Updated last year
• JunyueCaoLab / EasySci
  Computational pipeline to process EasySci-RNA data.
  ☆21Updated last year
• yunshun / HumanBreast10X
  ☆26Updated 3 years ago
• ZxZhou4150 / Redeconve
  Deconvolution of spatial transcriptomics at single-cell resolution
  ☆20Updated last year
• Famingzhao / NEPAL
  Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancer
  ☆15Updated 11 months ago
• gabrielakinker / CCLE_heterogeneity
  ☆60Updated last year
• klarman-cell-observatory / HTAPP-Pipelines
  A record of the analysis pipelines used to create the HTAPP data
  ☆33Updated 7 months ago
• karthikj89 / scgenetics
  identifying disease critical cell types and programs from single cell RNAseq
  ☆57Updated 3 years ago
• franklinhuanglab / scRNA-seq-Analysis-of-Prostate-Cancer-Samples
  Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…
  ☆24Updated 3 years ago
• Xiaxy-XuLab / PanCAF
  ☆37Updated 3 years ago
• arc85 / singleseqgset
  Gene set enrichment analysis for single-cell RNAseq data
  ☆30Updated 2 years ago
• sdentro / copykat_pipeline
  ☆13Updated last year
• PFPrzytycki / CellWalkR
  CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements
  ☆21Updated last month