Teddy-XiongGZ / DeepGSEALinks
☆17Updated 11 months ago
Alternatives and similar repositories for DeepGSEA
Users that are interested in DeepGSEA are comparing it to the libraries listed below
Sorting:
- ☆20Updated last year
- Supporting material for publication: "Ovarian cancer mutational processes drive site-specific immune evasion"☆22Updated last month
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 3 months ago
- MACA: Marker-based automatic cell-type annotation for single cell expression data☆25Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq data☆26Updated 3 years ago
- ☆17Updated 2 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆21Updated last year
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated 3 weeks ago
- ☆18Updated 2 months ago
- Identify cell type based on cell markers for single cell squencing☆11Updated 11 months ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆12Updated last year
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆33Updated 3 years ago
- An R/Bioconductor package to identify higher-order molecular phenotypes☆16Updated last year
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 8 months ago
- Information-based dimensionality reduction☆29Updated 6 months ago
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Updated 5 months ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- Single cell STEM (scSTEM) is a shiny app based R package for visualizing and clustering genes in pseudotime ordered single cell RNA-seq d…☆18Updated 2 years ago
- single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, genome subcompartment☆20Updated last year
- ☆14Updated 4 months ago
- Materials and scripts for building cell type encyclopedia table☆19Updated 5 months ago
- ☆20Updated last year
- ☆17Updated 9 months ago
- A single-cell and spatial RNA-seq database for Alzheimer’s Disease☆23Updated 11 months ago
- Gene Expression Decomposition and Integration☆17Updated 4 months ago
- Computational pipeline to process EasySci-RNA data.☆20Updated last year
- ☆25Updated 3 months ago
- Unagi: Deep Generative Model for Deciphering Cellular Dynamics and In-Silico Drug Discovery in Complex Diseases.☆17Updated this week
- A tissue-specific single-cell biological age model☆11Updated last year
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆28Updated 6 months ago