bioinfo-biols / SEVtrasLinks
sEV-containing droplet identification in scRNA-seq data (SEVtras)
☆26Updated 9 months ago
Alternatives and similar repositories for SEVtras
Users that are interested in SEVtras are comparing it to the libraries listed below
Sorting:
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆24Updated last year
- A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types☆11Updated 9 months ago
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆29Updated last year
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆29Updated 4 years ago
- ☆32Updated last year
- Spatial transcriptomics of heart tissue☆27Updated 3 years ago
- Single-Cell Inference of Class Switch Recombination☆20Updated 3 weeks ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated last year
- Estimation of Single-Cell Potency with Single Cell Entropy☆43Updated 2 years ago
- We describe a transcriptional reference map of human natural killer (NK) cells based on analysis of scRNA-seq data from both blood and ti…☆14Updated last year
- ☆12Updated last year
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆31Updated 3 years ago
- Code for the spatial transcriptomic paper on IPF lungs☆20Updated last year
- Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper☆53Updated 10 months ago
- ☆24Updated 2 years ago
- ☆16Updated last year
- ☆29Updated last week
- ☆30Updated 7 months ago
- ☆46Updated last year
- Code used to create the core and extended GBmap, including downstream analyses (cell-cell interactions, spatial transcriptomics deconvolu…☆65Updated 2 years ago
- Unsupervised Inference of Developmental Directions for Single Cells☆22Updated last year
- ☆22Updated 2 years ago
- Functions for single cell data analysis☆32Updated 4 years ago
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆15Updated 2 months ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 4 years ago
- ☆10Updated last year
- ☆32Updated 9 months ago
- Publically accessible code for DIISCO method☆12Updated last month
- ☆55Updated last year
- Aligning gene expression trajectories of single-cell reference and query systems☆77Updated 3 months ago