PFPrzytycki / CellWalkRLinks
CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements
☆21Updated 2 months ago
Alternatives and similar repositories for CellWalkR
Users that are interested in CellWalkR are comparing it to the libraries listed below
Sorting:
- scWGCNA☆61Updated 3 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆30Updated 3 years ago
- Visualizing Somatic Alterations of 10X Spatial Transcriptomics Data☆14Updated last year
- Single-cell Case Control Analysis☆52Updated last week
- ☆62Updated 2 years ago
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆38Updated 2 years ago
- Landscape Single Cell Entropy☆21Updated 5 years ago
- identifying disease critical cell types and programs from single cell RNAseq☆57Updated 3 years ago
- ☆23Updated 2 months ago
- Gene Set + S2G strategy annotations analyzed for disease architecture☆58Updated 3 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 4 years ago
- ☆43Updated 4 years ago
- ☆44Updated last month
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆39Updated this week
- Cluster Identity Predictor (R package implementation)☆21Updated 3 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year
- ☆39Updated 4 months ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆44Updated 3 months ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆37Updated last month
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 6 years ago
- ☆35Updated 9 months ago
- ☆32Updated 11 months ago
- R package for Flexible dot plots☆29Updated 3 years ago
- Pan-Cancer Single Cell Classifier☆81Updated last year
- A unified interface to spatial transcriptomics deconvolution tools☆45Updated last month
- Mosaic single cell data integration using non-overlapping features☆37Updated 3 years ago
- R package to detect breakpoints and assign somies to scATAC-seq data☆42Updated 3 weeks ago
- Clonalscope is a subclone detection method based on copy number alterations (CNAs) for single-cell and ST tumor sequencing data. Clonalsc…☆24Updated 2 months ago
- R package for specialised analysis of single cell data☆40Updated 3 years ago