stephenslab / gbcdLinks
R package for generalized binary covariance decomposition.
☆10Updated last month
Alternatives and similar repositories for gbcd
Users that are interested in gbcd are comparing it to the libraries listed below
Sorting:
- ☆12Updated 4 months ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆18Updated 11 months ago
- Lung cancer 10X analysis☆11Updated 4 years ago
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆14Updated last month
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆14Updated last year
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆27Updated 4 years ago
- Trends in single cell papers☆16Updated 11 months ago
- ☆17Updated 11 months ago
- ☆15Updated 3 years ago
- ☆13Updated 9 months ago
- Computational pipeline to process EasySci-RNA data.☆21Updated last year
- Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"☆16Updated 8 months ago
- ☆20Updated last month
- Custom codes accompanying single cell spatial transcriptomic study on the healthy human lung☆12Updated last year
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 5 months ago
- python API to the CoGAPS NMF package☆19Updated 3 months ago
- R and MATLAB scripts for MAGICAL☆11Updated last year
- Independent Component Analysis decipher functional modules for better cell clustering and annotation☆17Updated 3 years ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Updated 6 months ago
- scripts for analyzing data of macrophage development in human☆10Updated 5 years ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Updated 2 years ago
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Updated 2 years ago
- ☆16Updated 4 years ago
- ☆17Updated last year
- Code used to process the data of the HBCA project☆30Updated last year
- Code to go along with https://doi.org/10.1016/j.cell.2022.09.010☆21Updated 3 years ago
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆29Updated 2 years ago
- ☆12Updated last year
- ☆12Updated last year
- ☆18Updated 2 years ago