hsmaan / IniquitateLinks
Analysis of imbalanced data and its impacts in a scRNA-seq integration setting
☆30Updated 4 months ago
Alternatives and similar repositories for Iniquitate
Users that are interested in Iniquitate are comparing it to the libraries listed below
Sorting:
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆19Updated last year
- A modular tool for proportion analysis in single-cell sequencing data☆22Updated 2 months ago
- ☆13Updated last month
- ☆17Updated 10 months ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated 2 months ago
- A record of the analysis pipelines used to create the HTAPP data☆33Updated 3 months ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 9 months ago
- ☆57Updated last year
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- RNA-velocity informed embeddings for visualizing cellular trajectories☆44Updated 2 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆28Updated 8 months ago
- Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics☆40Updated last month
- cell type deconvolution for multi-condition bulk RNA-seq data☆27Updated 3 years ago
- ☆19Updated 3 months ago
- iterative clustering pipeline of big single cell datasets.☆33Updated 3 months ago
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆28Updated last year
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆37Updated 4 years ago
- ☆22Updated 2 years ago
- Code used to process the data of the HBCA project☆30Updated last year
- Single-cell Case Control Analysis☆51Updated 8 months ago
- ☆27Updated 4 months ago
- Landscape Single Cell Entropy☆20Updated 4 years ago
- Inferring cell-cell interactions from pseudotime ordering of scRNA-Seq data☆25Updated 2 years ago
- Single-cell Mutual Information-based Network Engineering Ranger☆19Updated last month
- cell type specific, trait-associated gene regulation☆27Updated 4 months ago
- Quasilinear data representations for single-cell omics data analysis☆42Updated 2 years ago
- Framework for Unified Single-Cell Analysis (FUSCA) is a software package for single-cell data analysis developed in R. At the moment, it …☆21Updated 2 years ago
- ☆40Updated this week
- Cell-type Relationship Analysis Workflow Done Across Distances☆34Updated last month
- ☆20Updated 3 weeks ago