jranek / delveLinks
Feature selection for preserving biological trajectories in single-cell data
☆20Updated 8 months ago
Alternatives and similar repositories for delve
Users that are interested in delve are comparing it to the libraries listed below
Sorting:
- A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data☆13Updated last year
- ANS_signature_scoring: A gene expression signature scoring Python package.☆16Updated 3 weeks ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Updated 11 months ago
- ☆23Updated 7 months ago
- Querying cellular states and programs by learning representations of gene sets☆15Updated 3 months ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated 2 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆45Updated 5 months ago
- A single-cell analysis toolkit to jointly analyze samples from distinct conditions☆34Updated 10 months ago
- Gene Expression Decomposition and Integration☆19Updated 11 months ago
- Learning motif contributions to cell transitions using sequence features and graphs.☆28Updated last year
- Difference in Intercellular Communication from scRNA-seq data☆24Updated 3 months ago
- ☆16Updated 2 years ago
- Algorithms for single-cell analysis☆29Updated 4 years ago
- Individual level Differential Expression Analysis for Single cells☆26Updated 3 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Updated last year
- Information-based dimensionality reduction☆29Updated last year
- Python code for cross-condition label refinement in single-cell data with HiDDEN☆14Updated last year
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆30Updated 2 years ago
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆11Updated last year
- ☆24Updated 4 months ago
- Landscape Single Cell Entropy☆21Updated 5 years ago
- R package for transfer learning of single-cell RNA-seq denoising☆30Updated 3 years ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 3 years ago
- Scripts from the GBM cellular states paper☆20Updated 4 years ago
- ☆12Updated 4 years ago
- Python package to interactively annotate histological images within a jupyter notebook☆18Updated 3 months ago
- Spatial RNA velocity☆10Updated last year
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- Code, data and analysis for moslin.☆15Updated last year
- ☆29Updated 2 years ago