y-hwang / gLMLinks
Genomic language model predicts protein co-regulation and function
☆84Updated 8 months ago
Alternatives and similar repositories for gLM
Users that are interested in gLM are comparing it to the libraries listed below
Sorting:
- Multi-class signal peptide prediction and structure decoding model.☆98Updated 10 months ago
- Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval☆120Updated last year
- ☆82Updated 2 years ago
- Feature map and function annotation of Proteins☆34Updated last year
- Neural Networks for Protein Sequence Alignment☆133Updated last year
- Transmembrane proteins predicted through Language Model embeddings☆42Updated 4 months ago
- DeepECtransformer☆29Updated 2 years ago
- ☆74Updated last year
- ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…☆57Updated 7 months ago
- ☆12Updated last year
- ☆75Updated last year
- Pipeline for searching and aligning contact maps for proteins, then running DeepFri's GCN.☆40Updated last week
- snakemake pipeline for creating trees from sequence sets☆93Updated last month
- ☆74Updated last year
- Multiple Protein Structure Alignment at Scale with FoldMason☆200Updated last month
- Evolutionary velocity with protein language models☆94Updated this week
- Official repository for the paper "Learning from pre-pandemic data to forecast viral antibody escape"☆69Updated 2 years ago
- A PyTorch implementation of "Automatic Identification and Virtual Directed Evolution of Antimicrobial Peptides with Explainable Deep Lear…☆41Updated 4 months ago
- Detection of remote homology by comparison of protein language model representations☆57Updated 11 months ago
- MSA(Multiple Sequence Alignment) visualization python package for sequence analysis☆168Updated last year
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆76Updated 3 months ago
- Python framework for doing ancestral sequence reconstruction