y-hwang / gLM
Genomic language model predicts protein co-regulation and function
☆73Updated last week
Alternatives and similar repositories for gLM:
Users that are interested in gLM are comparing it to the libraries listed below
- ☆66Updated 6 months ago
- ☆71Updated last year
- Feature map and function annotation of Proteins☆32Updated 9 months ago
- Multi-class signal peptide prediction and structure decoding model.☆83Updated last month
- Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval☆101Updated 7 months ago
- Transmembrane proteins predicted through Language Model embeddings☆35Updated 2 months ago
- ☆61Updated 5 months ago
- Official release of the ProGen models☆29Updated 2 months ago
- ☆36Updated 2 months ago
- ColabFold protocol☆50Updated 5 months ago
- ☆29Updated last year
- Evolutionary velocity with protein language models☆90Updated last year
- Repository for Protein-Vec, a protein embedding mixture of experts model☆37Updated last year
- ☆34Updated 6 months ago
- Protein language model trained on coding DNA☆46Updated 5 months ago
- A NumPy port of the foldseek code for encoding protein structures to 3di.☆44Updated 3 weeks ago
- MSA(Multiple Sequence Alignment) visualization python package for sequence analysis☆123Updated 3 months ago
- ☆25Updated 9 months ago
- UniProt Id Mapping through API☆31Updated 5 months ago
- Detection of remote homology by comparison of protein language model representations☆49Updated 3 months ago
- Code repository of "Deep generative design of RNA family sequences"☆32Updated 8 months ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆50Updated 11 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆82Updated last year
- Geometric deep learning of protein–DNA binding specificity☆64Updated last week
- snakemake pipeline for creating trees from sequence sets☆76Updated 2 weeks ago
- A domain parser for Alphafold models☆34Updated last year
- ☆78Updated 5 months ago
- ☆49Updated 9 months ago
- Struct2GO:protein function prediction based on Graph pooling algorithm and AlphaFold2 structure information☆26Updated last year
- Python framework for doing ancestral sequence reconstruction☆38Updated 8 months ago