Alternatives and similar repositories for _2023_Blaabjerg_SSEmb

Users that are interested in _2023_Blaabjerg_SSEmb are comparing it to the libraries listed below

• KULL-Centre / _2024_cagiada_stability
  ☆71Updated 8 months ago
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆33Updated last year
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆47Updated last month
• HannesStark / CodonMPNN
  ☆28Updated 11 months ago
• petergroth / kermut
  This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …
  ☆40Updated 3 months ago
• gitter-lab / metl
  Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models
  ☆58Updated 3 weeks ago
• ProteinDesignLab / protpardelle-1c
  Updated Protpardelle models with more robust motif scaffolding and multichain support
  ☆48Updated this week
• danny305 / StabilityOracle
  ☆29Updated last month
• skalyaanamoorthy / PSLMs
  ☆21Updated last year
• PKUliujl / GeoSeqBuilder
  ☆29Updated 9 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆57Updated 6 months ago
• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆32Updated 2 years ago
• liuyf020419 / SCUBA-D
  ☆62Updated last year
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆60Updated 2 years ago
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆63Updated 2 months ago
• luo-group / MODIFY
  ML-optimized library design with improved fitness and diversity for protein engineering
  ☆36Updated 2 weeks ago
• ShenLab / SeqDance
  code for SeqDance/ESMDance, biophysics-informed protein language models
  ☆41Updated 7 months ago
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆31Updated last year
• luwei0917 / BindingGYM
  ☆34Updated 3 months ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆71Updated 5 months ago
• Huatsing-Lau / PPB-Affinity-DataPrepWorkflow
  workflow used to prepare PPB-Affinity database
  ☆28Updated last year
• violet-sto / Bridge-IF
  Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"
  ☆18Updated 8 months ago
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆46Updated 2 weeks ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆70Updated 3 weeks ago
• Bitbol-Lab / rag-esm
  RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences
  ☆25Updated 3 months ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆60Updated last month
• CarbonMatrixLab / immunefold
  Official open-source of Accurate structure prediction of immune proteins using parameter-efficient transfer learning
  ☆22Updated 8 months ago
• samgoldman97 / enzyme-datasets
  Enzyme datasets used to benchmark enzyme-substrate promiscuity models
  ☆40Updated 4 years ago
• JoreyYan / Originflow
  ☆19Updated 6 months ago
• HySonLab / LatentDE
  LatentDE: Latent-based Directed Evolution for Protein Sequence Design
  ☆36Updated 7 months ago