Alternatives and similar repositories for ColabBio

Users that are interested in ColabBio are comparing it to the libraries listed below

• KULL-Centre / _2024_cagiada_stability
  ☆70Updated 4 months ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆70Updated last month
• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆34Updated 4 months ago
• bwicky / oligomer_hallucination
  ☆36Updated last year
• dakpinaroglu / Frame2seq
  Structure-conditioned masked language modeling for protein sequence design
  ☆65Updated last year
• programmablebio / pepmlm
  Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling
  ☆55Updated last month
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆34Updated 9 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆63Updated 3 weeks ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆55Updated 9 months ago
• jonfunk21 / ProteusAI
  ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…
  ☆60Updated 5 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆51Updated 2 months ago
• bene837 / af2seq
  ☆44Updated 10 months ago
• AbSciBio / igdesign
  ☆43Updated 7 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆38Updated 10 months ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆41Updated last week
• liuyf020419 / SCUBA-D
  ☆60Updated last year
• Profluent-AI / proseLM-public
  Adapting protein language models for structure-conditioned design
  ☆40Updated last year
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆50Updated 2 years ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆63Updated 8 months ago
• zzhangzzhang / pLMs-interpretability
  ☆28Updated 9 months ago
• silicogenesis / protkit
  A Unified Approach to Protein Engineering
  ☆42Updated last year
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆48Updated last week
• Bitbol-Lab / rag-esm
  RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences
  ☆17Updated last month
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆40Updated 2 months ago
• wells-wood-research / PDBench
  PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.
  ☆30Updated 2 years ago
• microsoft / seq2symm
  Homomer symmetry prediction from protein sequence
  ☆30Updated 4 months ago
• PKUliujl / GeoSeqBuilder
  ☆28Updated 6 months ago
• ShenLab / SeqDance
  code for SeqDance/ESMDance, biophysics-informed protein language models
  ☆39Updated 4 months ago
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆19Updated last month
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆68Updated 11 months ago