sokrypton / ColabBioLinks
random colab notebooks for biology
☆25Updated 3 months ago
Alternatives and similar repositories for ColabBio
Users that are interested in ColabBio are comparing it to the libraries listed below
Sorting:
- ☆67Updated 3 months ago
- ☆41Updated 5 months ago
- Metrics for our protein design competitions.☆31Updated 7 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆69Updated last week
- ☆57Updated 8 months ago
- dMaSIF implementation for google colab☆32Updated 2 years ago
- Source code and examples for AlphaFold Unmasked☆68Updated last month
- ☆35Updated last year
- ☆21Updated 8 months ago
- Efficient manipulation of protein structures in Python☆54Updated 7 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆41Updated last month
- Ultra-fast in-silico structure mutation☆34Updated 2 months ago
- code for SeqDance/ESMDance, biophysics-informed protein language models☆37Updated 2 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆49Updated last month
- ☆27Updated 8 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆77Updated last year
- Results and data from the pilot round of the Protein Engineering Tournament☆29Updated 3 months ago
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆35Updated 3 years ago
- ☆38Updated 9 months ago
- Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape☆29Updated 10 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆62Updated 4 months ago
- AlphaBind code + model accompanying pre-print☆56Updated 6 months ago
- ☆17Updated 5 months ago
- Efficient implementatin of ESM family.☆58Updated 5 months ago
- PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.☆29Updated 2 years ago
- ☆27Updated 4 months ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 4 years ago
- The software system of improving AlphaFold2- and AlphaFold-Multimer-based protein tertiary & quaternary structure prediction. It was deve…☆28Updated last year
- Tool for modelling the CDRs of antibodies☆48Updated 2 years ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆55Updated 10 months ago