Alternatives and similar repositories for ColabBio

Users that are interested in ColabBio are comparing it to the libraries listed below

• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆71Updated 3 months ago
• KULL-Centre / _2024_cagiada_stability
  ☆71Updated 6 months ago
• bwicky / oligomer_hallucination
  ☆36Updated last year
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆35Updated 11 months ago
• the-protein-engineering-tournament / pet-pilot-2023
  Results and data from the pilot round of the Protein Engineering Tournament
  ☆30Updated 6 months ago
• AbSciBio / igdesign
  ☆46Updated 8 months ago
• zzhangzzhang / pLMs-interpretability
  ☆29Updated 11 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆54Updated 4 months ago
• Profluent-AI / proseLM-public
  Adapting protein language models for structure-conditioned design
  ☆41Updated last year
• RosettaCommons / AF2_peptide_hallucination
  Code for designing binders to flexible peptides with AlphaFold2 Hallucination
  ☆28Updated last year
• wells-wood-research / PDBench
  PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.
  ☆30Updated 2 years ago
• mjendrusch / salad
  protein structure generation with sparse all-atom denoising models
  ☆40Updated last week
• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆34Updated 5 months ago
• Bitbol-Lab / rag-esm
  RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences
  ☆24Updated last month
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆66Updated 10 months ago
• jonfunk21 / ProteusAI
  ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…
  ☆63Updated 3 weeks ago
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆50Updated 2 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆39Updated last year
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆50Updated 2 years ago
• flyark / AFM-LIS
  Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)
  ☆58Updated 6 months ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆58Updated last week
• PKUliujl / GeoSeqBuilder
  ☆28Updated 8 months ago
• oxpig / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆31Updated last year
• ranganathanlab / bmDCA
  Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).
  ☆35Updated 5 years ago
• liuyf020419 / SCUBA-D
  ☆61Updated last year
• Exscientia / abodybuilder3
  ☆68Updated 11 months ago
• patrickbryant1 / Cfold
  Structure prediction of alternative protein conformations
  ☆79Updated 7 months ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆43Updated 2 months ago
• dakpinaroglu / Frame2seq
  Structure-conditioned masked language modeling for protein sequence design
  ☆69Updated last year
• brennanaba / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆32Updated 2 years ago