TattaBio / OMGLinks
☆47Updated last year
Alternatives and similar repositories for OMG
Users that are interested in OMG are comparing it to the libraries listed below
Sorting:
- ☆74Updated last year
- ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…☆57Updated 7 months ago
- a collection of colabs useful for molecular biology☆31Updated last year
- GraphPart, a data partitioning method for ML on biological sequences☆32Updated 2 years ago
- Fast protein domain structure embedding+search tool☆27Updated 2 months ago
- Supporting repository for "Protein language models trained on multiple sequence alignments learn phylogenetic relationships" (https://www…☆17Updated 10 months ago
- Diverse Genomic Embedding Benchmark☆49Updated 3 months ago
- DeepECtransformer☆29Updated 2 years ago
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆27Updated 2 years ago
- Long disorder consensus predictor☆17Updated 3 months ago
- Repository for "Nearest neighbor search on embeddings rapidly identifies distant protein relations"☆13Updated 2 years ago
- Code for LazyAF pipeline☆21Updated last year
- ☆23Updated 2 years ago
- ☆25Updated 2 years ago
- Benchmarking Pipeline for Prediction of Protein-Protein Interactions☆14Updated 3 years ago
- Modeling whole bacterial genome as a sequence of proteins.☆81Updated last month
- ColabFold protocol☆57Updated last year
- Phyla: Towards a Foundation Model for Phylogenetic Inference☆24Updated 3 weeks ago
- ☆18Updated 6 months ago
- Python framework for doing ancestral sequence reconstruction☆41Updated last year
- ☆47Updated last month
- ☆19Updated last week
- ☆32Updated 2 months ago
- Detection of remote homology by comparison of protein language model representations☆57Updated 11 months ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆34Updated 3 months ago
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆41Updated 2 years ago
- Evolutionary velocity with protein language models☆94Updated this week
- Repository for Protein-Vec, a protein embedding mixture of experts model☆38Updated last year
- Pipeline for searching and aligning contact maps for proteins, then running DeepFri's GCN.☆40Updated last week
- Benchmarking scripts for Gaia☆11Updated 8 months ago