TattaBio / OMG
☆31Updated 7 months ago
Alternatives and similar repositories for OMG:
Users that are interested in OMG are comparing it to the libraries listed below
- Fast protein domain structure embedding+search tool☆14Updated 2 months ago
- Diverse Genomic Embedding Benchmark☆43Updated 5 months ago
- Code for LazyAF pipeline☆21Updated last year
- a collection of colabs useful for molecular biology☆31Updated last year
- DeepECtransformer☆24Updated last year
- ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…☆33Updated last week
- Benchmarking Pipeline for Prediction of Protein-Protein Interactions☆11Updated 3 years ago
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆28Updated last year
- Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models☆12Updated 2 years ago
- Pipeline for searching and aligning contact maps for proteins, then running DeepFri's GCN.☆37Updated 3 months ago
- The aim of this repository is to provide simple tools to help those working with ColabFold BATCH both for pre and post-processing steps.☆16Updated last year
- Maximum likelihood structural phylogenetics by including Foldseek 3Di characters. Supporting Information for Puente-Lelievre et al. 2023n…☆19Updated 8 months ago
- Rendering protein mutation movies from predicted 3D structures☆20Updated last year
- ☆58Updated 5 months ago
- The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.☆19Updated last year
- ☆32Updated 5 months ago
- Repository for "Nearest neighbor search on embeddings rapidly identifies distant protein relations"☆11Updated last year
- Detection of remote homology by comparison of protein language model representations☆48Updated 3 months ago
- ☆22Updated last year
- Protein Structure Archiver☆12Updated 9 months ago
- Ancestral Sequence Reconstruction in Python☆13Updated 5 years ago
- Cross-protein transfer learning for variant effect prediction☆20Updated last year
- ☆23Updated last year
- Supporting repository for "Protein language models trained on multiple sequence alignments learn phylogenetic relationships" (https://www…☆17Updated 2 months ago
- ☆19Updated 3 months ago
- GraphPart, a data partitioning method for ML on biological sequences☆24Updated last year
- Map genetic variants and protein positions to protein interfaces in 3D☆13Updated last year
- Protein Sequence Annotation with Language Models☆19Updated 4 months ago
- Python framework for doing ancestral sequence reconstruction☆37Updated 8 months ago