Alternatives and similar repositories for OMG

Users that are interested in OMG are comparing it to the libraries listed below

• TattaBio / gLM2
  ☆77Updated last year
• TattaBio / DGEB
  Diverse Genomic Embedding Benchmark
  ☆50Updated 4 months ago
• graph-part / graph-part
  GraphPart, a data partitioning method for ML on biological sequences
  ☆33Updated 2 years ago
• psipred / merizo_search
  Fast protein domain structure embedding+search tool
  ☆27Updated 4 months ago
• microsoft / protnote
  ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…
  ☆58Updated 8 months ago
• hgbrian / biocolabs
  a collection of colabs useful for molecular biology
  ☆31Updated last year
• BioComputingUP / MobiDB-lite
  Long disorder consensus predictor
  ☆17Updated 4 months ago
• KULL-Centre / _2022_functional-sites-cagiada
  ☆23Updated 2 years ago
• Bitbol-Lab / Phylogeny-MSA-Transformer
  Supporting repository for "Protein language models trained on multiple sequence alignments learn phylogenetic relationships" (https://www…
  ☆17Updated last year
• kaistsystemsbiology / DeepProZyme
  DeepECtransformer
  ☆29Updated 2 years ago
• UCLOrengoGroup / cath-alphaflow
  ☆23Updated 2 months ago
• TurtleTools / caretta
  A software-suite to perform multiple protein structure alignment and structure feature extraction.
  ☆31Updated 2 years ago
• ThomasCMcLean / LazyAF
  Code for LazyAF pipeline
  ☆21Updated last year
• maslov-group / DR-BERT
  ☆25Updated 2 years ago
• labstructbioinf / pLM-BLAST
  Detection of remote homology by comparison of protein language model representations
  ☆61Updated last year
• mims-harvard / Phyla
  Phyla: Towards a Foundation Model for Phylogenetic Inference
  ☆27Updated 2 months ago
• steineggerlab / colabfold-protocol
  ColabFold protocol
  ☆56Updated last year
• Llannelongue / B4PPI
  Benchmarking Pipeline for Prediction of Protein-Protein Interactions
  ☆14Updated 3 years ago
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆95Updated last month
• jbloomlab / SARS-CoV-2-RBD_DMS
  Deep mutational scanning of the receptor-binding domain of SARS-CoV-2 Spike
  ☆46Updated 3 years ago
• konstin / knn-for-homology
  Repository for "Nearest neighbor search on embeddings rapidly identifies distant protein relations"
  ☆13Updated 2 years ago
• clairemcwhite / vcmsa
  ☆30Updated 2 years ago
• tymor22 / protein-vec
  Repository for Protein-Vec, a protein embedding mixture of experts model
  ☆38Updated last year
• jurgjn / af-protein-universe
  Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…
  ☆27Updated 2 years ago
• sokrypton / seqmodels
  ☆32Updated 4 months ago
• PDB-REDO / AlphaBridge
  ☆48Updated last month
• macwiatrak / Bacformer
  Modeling whole bacterial genome as a sequence of proteins.
  ☆84Updated 2 months ago
• ProteinsWebTeam / interpro7-api
  ☆19Updated this week
• esbgkannan / kibby
  A fast, alignment-free method for estimating sequence conservation using protein sequence embedding
  ☆17Updated 2 years ago
• liudan111 / PLM-interact
  PLM-interact: extending protein language models to predict protein-protein interactions.
  ☆56Updated 4 months ago