Alternatives and similar repositories for Merizo

Users that are interested in Merizo are comparing it to the libraries listed below

• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆44Updated last month
• mabr3112 / riff_diff_protflow
  ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.
  ☆27Updated this week
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆62Updated 4 months ago
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆26Updated last month
• bene837 / af2seq
  ☆43Updated 9 months ago
• luo-group / MODIFY
  ML-optimized library design with improved fitness and diversity for protein engineering
  ☆35Updated 10 months ago
• PKUliujl / GeoSeqBuilder
  ☆27Updated 4 months ago
• minmarg / gtalign_alpha
  GTalign, HPC protein structure alignment, superposition and search (alpha release)
  ☆45Updated 3 weeks ago
• liuyf020419 / SCUBA-D
  ☆60Updated last year
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆54Updated 7 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated 2 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆59Updated 7 months ago
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆28Updated last year
• brianjimenez / pydock_tutorial
  PyDock Tutorial
  ☆32Updated 6 years ago
• SNU-CSSB / RF2-Lite
  ☆30Updated last year
• KULL-Centre / _2024_cagiada_stability
  ☆67Updated 3 months ago
• samuelmurail / af_analysis
  Analysis of alphafold and colabfold results
  ☆28Updated this week
• danny305 / StabilityOracle
  ☆25Updated last year
• dina-lab3D / CombFold
  ☆83Updated 9 months ago
• LongxingCao / pymol_scripts
  bakerlab pymol scripts
  ☆23Updated 5 years ago
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆66Updated 10 months ago
• DunbrackLab / IPSAE
  Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3
  ☆59Updated 2 months ago
• ievapudz / TemStaPro
  TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
  ☆57Updated last year
• SLx64 / af3cli
  A command-line interface and Python library for generating AlphaFold3 input files.
  ☆34Updated 3 weeks ago
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆44Updated 7 months ago
• meneshail / TopoDiff
  Code release for "Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding"
  ☆25Updated this week
• regeneron-mpds / propermab
  ☆27Updated 2 months ago
• bigict / ProDESIGN-LE
  An accurate and efficient protein sequence design approach
  ☆24Updated 3 months ago
• Kuhlman-Lab / evopro
  ☆81Updated last week
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆56Updated last month