TattaBio / gLM2Links
☆68Updated 8 months ago
Alternatives and similar repositories for gLM2
Users that are interested in gLM2 are comparing it to the libraries listed below
Sorting:
- A NumPy port of the foldseek code for encoding protein structures to 3di.☆56Updated 3 months ago
- ☆68Updated 9 months ago
- ☆40Updated 9 months ago
- Diverse Genomic Embedding Benchmark☆45Updated 3 months ago
- A domain parser for Alphafold models☆38Updated last year
- Repository for Protein-Vec, a protein embedding mixture of experts model☆38Updated last year
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆73Updated 6 months ago
- ☆30Updated last year
- Detection of remote homology by comparison of protein language model representations☆54Updated 6 months ago
- Biological prediction models made simple.☆43Updated last month
- Genomic language model predicts protein co-regulation and function☆81Updated 3 months ago
- Efficient implementatin of ESM family.☆56Updated 5 months ago
- ☆37Updated 5 months ago
- Evolutionary velocity with protein language models☆93Updated last year
- ☆30Updated last year
- GraphPart, a data partitioning method for ML on biological sequences☆28Updated last year
- Fast protein domain structure embedding+search tool☆21Updated last month
- ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…☆51Updated last month
- ☆19Updated 8 months ago
- Protein Design by Machine Learning guided Directed Evolution☆43Updated 2 months ago
- Protein language model trained on coding DNA☆47Updated 8 months ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆59Updated 4 years ago
- Fast indexing and search of discontinuous motifs in protein structures☆22Updated 2 weeks ago
- Local homology search powered by ESM-2 language model, foldseek, hhsuite, and hmmer.☆15Updated 5 months ago
- ☆21Updated last month
- Results and data from the pilot round of the Protein Engineering Tournament☆29Updated 3 months ago
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆34Updated 3 years ago
- Transmembrane proteins predicted through Language Model embeddings☆37Updated last month
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆75Updated last year
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆88Updated last year