biocore / wolLinks
Reference Phylogeny for Bacterial and Archaeal Genomes
☆25Updated 5 months ago
Alternatives and similar repositories for wol
Users that are interested in wol are comparing it to the libraries listed below
Sorting:
- TransAnnot - a fast transcriptome annotation pipeline☆20Updated last year
- Utility program for extracting sequences from a fasta/fastq file☆35Updated last year
- VIRULIGN: fast codon-correct alignment and annotation of viral genomes☆35Updated 4 years ago
- OPAL: Open-community Profiling Assessment tooL☆30Updated 2 weeks ago
- FishTaco (Functional Shifts Taxonomic Contributors) is a metagenomic computational framework that aims to identify the driver taxa of mic…☆24Updated 4 years ago
- Influenza genome analysis Nextflow workflow☆24Updated 2 weeks ago
- Prokaryotic Pangenome Analysis☆24Updated 4 years ago
- ☆43Updated last year
- A containerized bioinformatics pipeline for viral metagenomic data analysis☆37Updated last year
- Toolkit for establishing, updating, and validating GTDB species clusters☆20Updated 3 months ago
- Reference-guided multiple sequence alignment of viral genomes☆70Updated 2 months ago
- Compute strain abundance in a defined microbial community☆10Updated 2 years ago
- A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies☆35Updated last year
- k-mer based Pipeline to identify the Serotype from Illumina NGS reads☆26Updated 2 years ago
- ☆31Updated 4 years ago
- Metagenomic species profiling with enhanced coverage of the human gut microbiome☆25Updated last year
- This tool estimates the completeness of KEGG pathway modules from the presence or absence of KEGG orthologues (KOs)☆29Updated this week
- Computational workflows for metagenomics tasks, by the Bhatt lab☆47Updated 2 years ago
- Annotation of Metabolite Origin via Networks: A tool for predicting putative metabolite origins for microbes or between microbes and host…☆25Updated last week
- MetaSNV, a metagenomic SNV calling pipeline.☆20Updated 3 years ago
- MutTui pipeline to reconstruct mutational spectra for bacterial and viral datasets☆33Updated last year
- Convert genbank files to a swath of other formats☆24Updated 2 weeks ago
- SHOOT.bio - the phylogenetic search engine☆27Updated 2 years ago
- A package to annotate protein sequences☆60Updated 11 months ago
- An RNA virus strain-level identification tool for short reads.☆23Updated last year
- Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)☆19Updated 5 years ago
- A comprehensive pipeline for short read metagenomic data☆25Updated 5 years ago
- ☆10Updated last month
- A snakemake workflow for metagenomic projects☆15Updated 2 years ago
- ☆26Updated 2 years ago