biocore / wol
Reference Phylogeny for Bacterial and Archaeal Genomes
☆25Updated 2 years ago
Alternatives and similar repositories for wol:
Users that are interested in wol are comparing it to the libraries listed below
- OPAL: Open-community Profiling Assessment tooL☆28Updated 3 months ago
- MAG Circularization Method☆33Updated 2 years ago
- ☆17Updated 2 months ago
- FishTaco (Functional Shifts Taxonomic Contributors) is a metagenomic computational framework that aims to identify the driver taxa of mic…☆24Updated 3 years ago
- Mandrake 🌿/👨🔬🦆 – Fast visualisation of the population structure of pathogens using Stochastic Cluster Embedding☆36Updated last month
- Automatic Assembly For The Fungi☆19Updated 2 months ago
- ☆43Updated last year
- BiG-MEx implementation as Docker images and R packages☆13Updated 3 years ago
- SynTracker is a pipeline, designated to determine the biological relatedness of conspecific strains (microbial strains of the same specie…☆27Updated 2 months ago
- Tool for constructing phylogenies and summarizing metabolic characteristics based on curated and custom profile HMMs☆18Updated 3 years ago
- Snakemake pipeline calculating KEGG orthologue abundance in metagenomic sequence data.☆24Updated 6 months ago
- MetaSNV, a metagenomic SNV calling pipeline.☆20Updated 3 years ago
- BinaRena: Interactive Visualization and Binning of Metagenomic Contigs☆31Updated 7 months ago
- Find Unique genomic Regions☆29Updated 2 weeks ago
- 🍊 💫 Trim, circularise and orient long read bacterial genome assemblies☆26Updated 5 years ago
- A metagenomic strategy for harnessing the chemical repertoire of the human microbiome☆32Updated last year
- ☆45Updated last year
- ☆13Updated 2 weeks ago
- Detect contigs of complete circular genomes☆23Updated 5 years ago
- MetaMLST is a computational tool for in-silico Multi-Locus Sequence Typing from metagenomic data.☆15Updated 2 years ago
- Unsupervised Clustering of Environmental Microbial Assemblies Using Coverage and Affinity Propagation☆29Updated 3 years ago
- Binnacle: Using Scaffolds to Improve the Contiguity and Quality of Metagenomic Bins☆13Updated 3 years ago
- Utility program for extracting sequences from a fasta/fastq file☆36Updated 3 months ago
- Toolkit for establishing, updating, and validating GTDB species clusters☆20Updated this week
- TransAnnot - a fast transcriptome annotation pipeline☆15Updated 2 months ago
- Locus and lineage tests for bacterial GWAS☆29Updated 7 years ago
- MicrobeDirectory 2.0☆22Updated 4 years ago
- Strain Prediction and Analysis with Representative SEquence☆18Updated 4 months ago
- PARTIE is a program to partition sequence read archive (SRA) metagenomics data into amplicon and shotgun data sets. The user-supplied ann…☆25Updated 2 years ago
- ShortBRED is a pipeline to take a set of protein sequences, reduce them to a set of unique identifying strings ("markers"), and then sear…☆28Updated 2 months ago