biocore / wol
Reference Phylogeny for Bacterial and Archaeal Genomes
☆25Updated last year
Related projects ⓘ
Alternatives and complementary repositories for wol
- OPAL: Open-community Profiling Assessment tooL☆27Updated 3 months ago
- Strain-level abundances estimation in metagenomic samples using variation graphs☆25Updated last year
- Utility program for extracting sequences from a fasta/fastq file☆36Updated 8 months ago
- VIRULIGN: fast codon-correct alignment and annotation of viral genomes☆31Updated 3 years ago
- SHOOT.bio - the phylogenetic search engine☆24Updated last year
- Locus and lineage tests for bacterial GWAS☆30Updated 7 years ago
- Prokaryotic Pangenome Analysis☆24Updated 2 years ago
- Tutorial for bacterial GWAS pipline and bugwas, created for Bodega Bay 2016 NGS workshop☆19Updated 8 years ago
- Unsupervised Clustering of Environmental Microbial Assemblies Using Coverage and Affinity Propagation☆29Updated 3 years ago
- A metagenomic strategy for harnessing the chemical repertoire of the human microbiome☆32Updated last year
- Find Unique genomic Regions☆29Updated this week
- Strain Prediction and Analysis with Representative SEquence☆18Updated 3 weeks ago
- 🍊 💫 Trim, circularise and orient long read bacterial genome assemblies☆25Updated 5 years ago
- Automatic eukaryotic taxonomic classification☆28Updated 2 months ago
- MAG Circularization Method☆33Updated 2 years ago
- ☆15Updated 3 weeks ago
- Tool for constructing phylogenies and summarizing metabolic characteristics based on curated and custom profile HMMs☆18Updated 2 years ago
- Toolkit for establishing, updating, and validating GTDB species clusters☆20Updated this week
- Multilocus sequence typing by blast using the schemes from PubMLST☆30Updated 2 years ago
- Gene-flank analysis tool☆26Updated 6 months ago
- Strain Resolution ON Graphs☆47Updated last year
- Comparison pipeline for Prokaryote Protein Coding Gene Predictors☆22Updated 7 months ago
- Analyze a set of genomes with the anvi'o pangenome pipeline☆17Updated last year
- Automatic Assembly For The Fungi☆19Updated last year
- FishTaco (Functional Shifts Taxonomic Contributors) is a metagenomic computational framework that aims to identify the driver taxa of mic…☆23Updated 3 years ago
- A pipeline for performing genome-wide association tests for bacterial genomes.☆28Updated 6 years ago
- ☆43Updated 7 months ago
- MetaSNV, a metagenomic SNV calling pipeline.☆20Updated 2 years ago
- Code for detecting genomic island insertions in clades of microbes.☆19Updated last year
- SynTracker is a pipeline, designated to determine the biological relatedness of conspecific strains (microbial strains of the same specie…☆25Updated last week