steineggerlab / Metabuli
Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.
☆130Updated this week
Alternatives and similar repositories for Metabuli:
Users that are interested in Metabuli are comparing it to the libraries listed below
- Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.☆67Updated 2 months ago
- Bioinformatics tool for Locus Visualisation☆91Updated this week
- MGnify genome analysis pipeline☆105Updated this week
- Phage Annotation using Protein Structures☆100Updated last week
- MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.☆59Updated 3 months ago
- Similarity networks of biosynthetic gene clusters☆102Updated last week
- ☆125Updated 6 months ago
- Follow up to Grace Blackwell's 661k dataset, for 2023☆93Updated last week
- A tool for representing genomic potential and transcriptomic expression into KEGG pathways☆54Updated 7 months ago
- ☆67Updated last week
- Systematic search of all known anti-phage systems.☆89Updated last month
- Logan Unitigs and Contigs☆123Updated 2 weeks ago
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆34Updated 6 months ago
- GenoVi, an automated customizable circular genome visualizer for bacteria and archaea☆86Updated last year
- A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data☆78Updated 3 months ago
- sensitive and precise assembly of short sequencing reads☆152Updated 5 months ago
- Supporting code for uncultivated gut virus manuscript☆68Updated last year
- a tool for inferring species tree from sequencing reads☆146Updated 3 weeks ago
- Find clustered hits from a BLAST search☆112Updated 3 months ago
- A modular end-to-end suite for in silico recovery, clustering, and analysis of prokaryotic, microeukaryotic, and viral genomes from metag…☆83Updated this week
- A toolbox for identifying mobile genetic element (MGE) insertions from short-read sequencing data of bacterial isolates.☆115Updated last year
- A toolkit for exploring prokaryotic methylation and base modifications in nanopore sequencing☆46Updated last month
- Pipeline for metabolic annotation of microbial genomes☆143Updated 8 months ago
- fast phage annotation program☆158Updated last month
- CLI tool to annotate genes with KOfam☆77Updated last year
- Local version of the virus identification and analysis web server (tool set)☆44Updated last week
- Open-source usearch☆108Updated 9 months ago
- Exploring the "dusk matter" of the RNA virosphere☆35Updated 2 years ago
- BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a f…☆34Updated 6 years ago
- PHANOTATE: a tool to annotate phage genomes.☆72Updated 3 months ago