IndexThePlanet / LoganLinks
Logan Unitigs and Contigs
☆176Updated 2 months ago
Alternatives and similar repositories for Logan
Users that are interested in Logan are comparing it to the libraries listed below
Sorting:
- Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.☆157Updated 3 weeks ago
- ☆132Updated last year
- RNA secondary structure/sequence profiles for homology search and alignment☆116Updated last year
- sensitive and precise assembly of short sequencing reads☆161Updated last year
- Phage Annotation using Protein Structures☆134Updated last week
- CCTyper: Automatic detection and subtyping of CRISPR-Cas operons☆102Updated last year
- Similarity networks of biosynthetic gene clusters☆141Updated last month
- Find clustered hits from a BLAST search☆126Updated last week
- Discovery of conserved gene clusters in multiple genomes☆116Updated 6 months ago
- A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data☆88Updated 3 months ago
- Fast and flexible ORF finder☆76Updated 3 years ago
- Systematic search of all known anti-phage systems.☆125Updated last month
- Webserver and command line tool for annotating engineered plasmids☆133Updated 4 months ago
- MGnify genome analysis pipeline☆109Updated last week
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆38Updated 5 months ago
- Bioinformatics tool for Locus Visualisation☆143Updated 3 weeks ago
- antiSMASH☆233Updated 2 weeks ago
- Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)☆210Updated 4 months ago
- MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.☆70Updated last month
- Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!☆171Updated 3 months ago
- Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.☆74Updated 7 months ago
- Predict oxygen, temperature, salinity, and pH preferences of bacteria and archaea from a genome☆58Updated 7 months ago
- A console-based alignment viewer☆116Updated 5 months ago
- MSA(Multiple Sequence Alignment) visualization python package for sequence analysis☆165Updated 11 months ago
- Run_dbcan V4, using genomes/metagenomes/proteomes of any assembled organisms (prokaryotes, fungi, plants, animals, viruses) to search for…☆153Updated 6 months ago
- A Rich renderable for viewing Multiple Sequence Alignments in the terminal.☆85Updated 3 years ago
- Download files from NCBI Entrez by accession☆130Updated last year
- a tool for inferring species tree from sequencing reads☆153Updated last month
- UniProt Id Mapping through API☆35Updated last month
- Informed prediction and analysis of bacterial metabolic pathways and genome-scale networks☆191Updated this week