leylabmpi / resmicoLinks
Identifying misassemblies via deep learning
☆11Updated last year
Alternatives and similar repositories for resmico
Users that are interested in resmico are comparing it to the libraries listed below
Sorting:
- Pipeline for metagenome and metatranscriptome joint assembly☆21Updated 2 years ago
- ☆26Updated 2 years ago
- Bacterial GWAS analysis☆46Updated 2 weeks ago
- Downstream processing of VAMB binning for Viral Elucidation☆54Updated last year
- Calculate assocations between genes and traits☆29Updated 10 months ago
- Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes☆35Updated 9 months ago
- KEGG Module Evaluation Tool☆32Updated 2 years ago
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆29Updated 2 years ago
- MAGinator - Accurate SNV calling and profiling of MAGs☆25Updated 8 months ago
- SameStr identifies shared strains between pairs of metagenomic samples based on the similarity of SNV profiles.☆24Updated 2 months ago
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆71Updated 3 weeks ago
- SynTracker is a pipeline, designated to determine the biological relatedness of conspecific strains (microbial strains of the same specie…☆39Updated 4 months ago
- Discover and annotate the virome☆58Updated 3 months ago
- MAGScoT - a MAG scoring and refinement tool☆42Updated last year
- Population genomics from metagenomes☆12Updated last year
- A comprehensive bacterial core gene-set annotation pipeline based on Roary and pairwise ILPs☆32Updated last month
- Meteor is a plateform for quantitative metagenomics profiling of complex ecosystems. Meteor relies on genes catalogue to perform species-…☆34Updated last month
- BinaRena: Interactive Visualization and Binning of Metagenomic Contigs☆33Updated last year
- strain-level analysis tools☆39Updated last year
- A Hierarchical Approach to Pangenomics Inference☆13Updated last year
- MAG Circularization Method☆32Updated 2 months ago
- ☆14Updated 2 years ago
- Structural and functional annotation of eukaryotic metagenome-assembled genomes☆22Updated 2 years ago
- Core ELEment Bias Removal In Metagenome Binned ORthologs: A pipeline to make pangenomes from MAGs☆26Updated last year
- Hydrocarbon biodegradation gene annotation☆19Updated 3 years ago
- Bin Chicken - recovery of low abundance and taxonomically targeted metagenome assembled genomes (MAGs) through strategic coassembly☆70Updated this week
- Classify metagenomic contigs as eukaryotic or prokaryotic☆43Updated 2 years ago
- scripts for microbiome analysis☆11Updated last year
- A toolkit for prokaryotic comparative genomics☆51Updated 3 months ago
- Metagenomic Analysis in Real Time☆29Updated 2 months ago