PLMSearch enables accurate and fast homologous protein search with only sequences as input
☆82Sep 9, 2025Updated 11 months ago
Alternatives and similar repositories for PLMSearch
Users that are interested in PLMSearch are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PLMAlign utilizes per-residue embeddings as input to obtain specific alignments and more refined similarity☆22Sep 9, 2025Updated 11 months ago
- Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval☆125Jun 28, 2026Updated 2 months ago
- ☆21May 7, 2024Updated 2 years ago
- Detection of remote homology by comparison of protein language model representations☆65Dec 16, 2024Updated last year
- Prediction of protein substitution impact using a directional substitution matrix and homolog alignments☆12Oct 25, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆76Sep 25, 2024Updated last year
- Pathogenfinder2☆19Apr 20, 2026Updated 4 months ago
- ☆93Feb 11, 2026Updated 6 months ago
- pretrained LookingGlass language model for biological read-length DNA sequences, and related models derived from transfer learning☆17Feb 19, 2026Updated 6 months ago
- ProTrek: illuminating the Protein Universe through Trimodal Protein Language Model (Connecting text and protein)☆215May 15, 2026Updated 3 months ago
- BioSeq-BLM: a platform for analyzing DNA, RNA and protein sequences based on biological language models☆14Aug 21, 2022Updated 4 years ago
- Versatile Embedding Network for Understanding protein Sequences☆26May 16, 2025Updated last year
- Graph Clustering Merger☆36Mar 25, 2024Updated 2 years ago
- ☆51Sep 25, 2024Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Taxonomy classification of viral sequences / contigs☆13Jul 15, 2025Updated last year
- Protein structure alignment and search algorithm☆99Aug 26, 2026Updated last week
- Foldseek enables fast and sensitive comparisons of large structure sets.☆1,287Aug 24, 2026Updated last week
- Prediction of virus-host association using protein language models and multiple instance learning