JudeWells / chainsawLinks
☆43Updated 11 months ago
Alternatives and similar repositories for chainsaw
Users that are interested in chainsaw are comparing it to the libraries listed below
Sorting:
- GTalign, high-performance protein structure alignment, superposition and search☆49Updated 2 weeks ago
- ☆30Updated last year
- Fast protein domain structure embedding+search tool☆25Updated 3 months ago
- A domain parser for Alphafold models☆40Updated last year
- Detection of remote homology by comparison of protein language model representations☆54Updated 8 months ago
- Machine learning prediction of enzyme optimum pH☆44Updated 4 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆58Updated 4 months ago
- ☆68Updated 11 months ago
- ☆22Updated 3 months ago
- Fast indexing and search of discontinuous motifs in protein structures☆76Updated last week
- Fast and accurate protein domain segmentation using Invariant Point Attention☆41Updated 3 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆91Updated last year
- Local homology search powered by ESM-2 language model, foldseek, hhsuite, and hmmer.☆15Updated 7 months ago
- A NumPy port of the foldseek code for encoding protein structures to 3di.☆70Updated last week
- ☆22Updated 2 years ago
- Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…☆37Updated 7 months ago
- Repository for Protein-Vec, a protein embedding mixture of experts model☆38Updated last year
- Graph Network for protein-protein interface including language model features☆32Updated last year
- Transmembrane proteins predicted through Language Model embeddings☆38Updated last month
- Python package to manage protein structures and their annotations☆43Updated last year
- scripts and facilities for in-silico mutagenesis with FoldX☆59Updated last month
- ☆27Updated last month
- ML toolset for creating TED: The Encyclopedia of Domains☆21Updated 3 months ago
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆26Updated 5 months ago
- ☆70Updated 10 months ago
- Fast protein structure searching or your money back☆111Updated 4 months ago
- ☆51Updated 2 weeks ago
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆73Updated 8 months ago
- Direct coupling analysis software for protein and RNA sequences☆52Updated last month
- ☆36Updated 2 months ago