Generating and scoring novel enzyme sequences with a variety of models and metrics
☆72Feb 21, 2026Updated 7 months ago
Alternatives and similar repositories for protein_scoring
Users that are interested in protein_scoring are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Gibbs sampling for generating protein sequences☆57Jan 17, 2025Updated last year
- ML-optimized library design with improved fitness and diversity for protein engineering☆37Nov 5, 2025Updated 10 months ago
- Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion☆19Feb 8, 2024Updated 2 years ago
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆39Apr 2, 2025Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆87Oct 24, 2025Updated 11 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Aligning protein generative models with experimental fitness☆152Mar 12, 2026Updated 6 months ago
- Sandbox for Deep-Learning based Computational Protein Design☆122Aug 14, 2026Updated last month
- SLIP is a sandbox environment for engineering protein sequences with synthetic fitness functions.☆20Jan 17, 2024Updated 2 years ago
- ☆10Mar 8, 2024Updated 2 years ago
- Diffusion-based all-atom protein generative model.☆239Aug 27, 2025Updated last year
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆274Sep 9, 2026Updated 2 weeks ago
- ☆219Sep 24, 2024Updated 2 years ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆72Aug 13, 2025Updated last year
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆50Nov 4, 2025Updated 10 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆38Nov 7, 2024Updated last year
- Graphormer Based Protein Sequence Design☆26Feb 2, 2024Updated 2 years ago
- ☆260Jul 31, 2024Updated 2 years ago
- Versatile computational pipeline for processing protein structure data for deep learning applications.☆283Feb 14, 2024Updated 2 years ago
- ☆103Jul 24, 2026Updated 2 months ago
- Public RFDiffusionAA repo☆489Jul 9, 2024Updated 2 years ago
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆13Nov 14, 2025Updated 10 months ago
- Directed evolution of proteins in sequence space with gradients☆97Oct 18, 2025Updated 11 months ago
- ☆84Jun 29, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- A conditionally adapted protein language model for the generation of enzymes☆24Nov 26, 2024Updated last year
- ☆32Dec 12, 2024Updated last year
- ☆40Sep 17, 2024Updated 2 years ago
- Generative diverse protein backbones by protein language model☆35Feb 27, 2026Updated 7 months ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆25Mar 6, 2025Updated last year
- ☆32Oct 7, 2025Updated 11 months ago
- Saprot: Protein Language Model with Structural Alphabet (AA+3Di)☆634Mar 8, 2026Updated 6 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆66May 21, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Making Protein Design accessible to all via Google Colab!☆943Aug 28, 2026Updated 3 weeks ago
- ☆11Jan 2, 2021Updated 5 years ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆117Apr 15, 2026Updated 5 months ago
- Official repository of EnzymeFlow☆102Dec 7, 2024Updated last year
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆126May 27, 2025Updated last year
- Implementation of Protein Invariant Point Packer (PIPPack)☆37May 28, 2024Updated 2 years ago
- GRACE: Generative Renaissance in Artificial Computational Enzyme Design☆19Jan 8, 2025Updated last year