mheinzinger / ProstT5

Related projects ⓘ

Alternatives and complementary repositories for ProstT5

• brianhie / efficient-evolution
  Efficient evolution from protein language models
  ☆175Updated last year
• steineggerlab / foldcomp
  Compressing protein structures effectively with torsion angles
  ☆160Updated 3 months ago
• pylelab / USalign
  Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins
  ☆110Updated this week
• phbradley / alphafold_finetune
  Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions
  ☆137Updated 10 months ago
• fhalab / MLDE
  A machine-learning package for navigating combinatorial protein fitness landscapes.
  ☆121Updated 2 years ago
• varun-shanker / structural-evolution
  ☆80Updated 3 months ago
• JeffSHF / ColabDock
  Code for ColabDock paper
  ☆125Updated 3 weeks ago
• SysBioChalmers / DLKcat
  Deep learning and Bayesian approach applied to enzyme turnover number for the improvement of enzyme-constrained genome-scale metabolic mo…
  ☆130Updated last year
• oxpig / ANARCI
  Antibody Numbering and Antigen Receptor ClassIfication
  ☆186Updated 5 months ago
• JinyuanSun / PymolFold
  Protein folding in Pymol
  ☆95Updated 3 months ago
• prihoda / AbNumber
  Convenience Python APIs for antibody numbering using ANARCI
  ☆84Updated last month
• martinpacesa / BindCraft
  User friendly and accurate binder design pipeline
  ☆268Updated this week
• KosinskiLab / AlphaPulldown
  ☆215Updated this week
• aqlaboratory / rgn2
  ☆101Updated 11 months ago
• patrickbryant1 / EvoBind
  In silico directed evolution of peptide binders with AlphaFold
  ☆116Updated 3 weeks ago
• oxpig / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆119Updated 4 months ago
• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆98Updated last year
• RosettaCommons / protein_generator
  Joint sequence and structure generation with RoseTTAFold sequence space diffusion
  ☆263Updated last week
• FreshAirTonight / af2complex
  Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.
  ☆150Updated 2 months ago
• Merck / BioPhi
  BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…
  ☆151Updated last month
• tbepler / prose
  Multi-task and masked language model-based protein sequence embedding models.
  ☆96Updated 3 years ago
• hefeda / design_tools
  A compilation of deep learning methods for protein design
  ☆94Updated 2 years ago
• RosettaCommons / DeepAb
  Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.
  ☆146Updated last year
• kuixu / alphafold
  Install alphafold on the local machine, get out of docker.
  ☆99Updated 2 years ago
• martinez-zacharya / TRILL
  Sandbox for Deep-Learning based Computational Protein Design
  ☆103Updated 3 weeks ago
• patrickbryant1 / Umol
  Protein-ligand structure prediction
  ☆202Updated 3 months ago
• rifdock / rifdock
  Rifdock Library for Conformational Search
  ☆138Updated 5 months ago
• alchemab / antiberta
  Public repository describing training and testing of AntiBERTa.
  ☆53Updated last year
• adaptyvbio / ProteinFlow
  Versatile computational pipeline for processing protein structure data for deep learning applications.
  ☆240Updated 8 months ago
• bjornwallner / DockQ
  DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
  ☆219Updated 2 months ago