tiara – a tool for DNA sequence classification
☆88Mar 2, 2024Updated 2 years ago
Alternatives and similar repositories for tiara
Users that are interested in tiara are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Classify metagenomic contigs as eukaryotic or prokaryotic☆46Feb 17, 2023Updated 3 years ago
- Eukfinder: A pipeline to retrieve microbial eukaryote genomes from metagenomic sequencing data☆29Jan 15, 2026Updated 7 months ago
- Automatic eukaryotic taxonomic classification☆33May 9, 2025Updated last year
- Classification of Eukaryotic and Prokaryotic sequences from metagenomic datasets☆83Jun 17, 2024Updated 2 years ago
- ☆37May 20, 2026Updated 3 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Structural and functional annotation of eukaryotic metagenome-assembled genomes☆24May 14, 2023Updated 3 years ago
- MDMcleaner the assessment, classification and refinement tool for microbial dark matter SAGs and MAGs☆25Mar 19, 2023Updated 3 years ago
- SemiBin: metagenomics binning with self-supervised deep learning☆174Aug 3, 2026Updated last month
- ☆63Jul 16, 2026Updated last month
- ☆24Dec 5, 2018Updated 7 years ago
- MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics☆211Aug 25, 2025Updated last year
- A metatranscriptomic pipeline optimized for the study of microeukaryotes.☆18Dec 30, 2025Updated 8 months ago
- ☆27Jun 20, 2023Updated 3 years ago
- Tool to estimate genome quality of microbial eukaryotes☆45Aug 14, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Bin Chicken - recovery of low abundance and taxonomically targeted metagenome assembled genomes (MAGs) through strategic coassembly☆79Updated this week
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆30Jun 13, 2023Updated 3 years ago
- ☆83Aug 23, 2026Updated last week
- Assessing the quality of metagenome-derived genome bins using machine learning☆276Mar 20, 2025Updated last year
- Variational autoencoder for metagenomic binning☆331Apr 27, 2026Updated 4 months ago
- A hybrid assembly and MAG recovery pipeline (and more!)☆118Updated this week
- The binning tool with dynamic contrastive learning and deep language model☆25Aug 14, 2026Updated 3 weeks ago
- phyloFlash - A pipeline to rapidly reconstruct the SSU rRNAs and explore phylogenetic composition of an illumina (meta)genomic dataset.☆90Oct 27, 2023Updated 2 years ago
- ☆36Aug 7, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Universal and efficient structure-based core gene phylogeny with Foldseek and ProstT5☆91Mar 12, 2026Updated 5 months ago
- From dereplication to genome enrichment: Enhancing genome recovery across metagenomic samples using MAGmax☆37Aug 28, 2026Updated last week
- Read alignment statistics for metagenomics☆406Jul 10, 2026Updated last month
- Utility to analyse a group of closely related MAgs/Genomes/bins/SUBs of more or less dubious origin☆15Sep 24, 2024Updated last year
- Python package for detection of chimerism and contamination in prokaryotic genomes.☆94May 11, 2026Updated 3 months ago
- Gmove is a gene prediction tool☆21Oct 9, 2024Updated last year
- MAGScoT - a MAG scoring and refinement tool☆49Apr 8, 2026Updated 4 months ago
- Rapid & standardized annotation of bacterial genomes, MAGs & plasmids☆675Aug 7, 2026Updated 3 weeks ago
- Robust individual and aggregate checksums for nucleotide sequences☆18Mar 3, 2026Updated 6 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!☆190Mar 17, 2026Updated 5 months ago
- HiCBin: binning metagenomic contigs and recovering metagenome-assembled genomes using Hi-C contact maps☆14May 4, 2023Updated 3 years ago
- A user-friendly workflow for phylogenomics☆232Updated this week
- GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.☆620May 20, 2026Updated 3 months ago
- Downstream processing of VAMB binning for Viral Elucidation☆55Jul 3, 2024Updated 2 years ago
- Protist Ribosomal Reference database (PR2) - SSU rRNA gene database☆87Feb 26, 2026Updated 6 months ago
- Pipeline for major biological analyses.☆35Mar 30, 2022Updated 4 years ago