☆19Aug 12, 2026Updated 2 weeks ago
Alternatives and similar repositories for gvclass
Users that are interested in gvclass are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Repository for codes, analyses and visualizations for the CAMI II challenges☆15Sep 4, 2023Updated 2 years ago
- Detection of NCLDV signatures in 'omic data☆35Dec 28, 2025Updated 8 months ago
- Binning Virus Genomes from Metagenomes☆76Jul 13, 2022Updated 4 years ago
- ViralCC: leveraging metagenomic proximity-ligation to retrieve complete viral genomes☆19Feb 3, 2026Updated 6 months ago
- Virus Protein Structural Analysis Toolkit☆14Sep 9, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- GTDB => NCBI☆16Nov 14, 2024Updated last year
- ViromeQC is a computational tool to benchmark and quantify non-viral contamination in VLP-enrihed viromes. ViromeQC provides an enrichmen…☆21Nov 15, 2022Updated 3 years ago
- CAT/BAT/RAT: tools for taxonomic classification of contigs and metagenome-assembled genomes (MAGs) and for taxonomic profiling of metage…☆235Jul 29, 2026Updated last month
- Ensemble binning strategies for combining the output of multiple binning methods.☆22Mar 11, 2023Updated 3 years ago
- Scripts used in the publication Tyler P. Barnum, Israel A. Figueroa, Charlotte I. Carlström, Lauren N. Lucas, Anna L. Engelbrektson, and …☆10Jun 19, 2019Updated 7 years ago
- Python3 package for plotting Venn diagrams (up to 4 sets)☆27Jun 5, 2026Updated 2 months ago
- The viral taxonomic assignment pipeline☆46Apr 16, 2026Updated 4 months ago
- Assign taxonomic ranks based on evolutionary divergence.☆24Mar 3, 2026Updated 5 months ago
- ☆35Jun 26, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Tools for analyzing trees☆13Apr 16, 2025Updated last year
- ALDEx tool to examine compositional high-throughput sequence data with Welch's t-test☆15Mar 7, 2019Updated 7 years ago
- SemiBin: metagenomics binning with self-supervised deep learning☆174Aug 3, 2026Updated 3 weeks ago
- Machine learning for accurate identification and classification of CRISPR-Cas systems☆24Dec 20, 2024Updated last year
- Rapid comparison and dereplication of genomes☆354Jul 16, 2026Updated last month
- viralFlye pipeline☆18Aug 12, 2024Updated 2 years ago
- Database of virus RdRP barcode sequences☆16Jul 5, 2024Updated 2 years ago
- Alignment-Free Taxonomic Classification Deep Learning Model☆17Apr 8, 2026Updated 4 months ago
- Downstream processing of VAMB binning for Viral Elucidation☆55Jul 3, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- MAG Circularization Method☆33Nov 4, 2025Updated 9 months ago
- Recovery of eukaryotic genomes using contrastive learning. A specialized metagenomic binning tool designed for recovering high-quality eu…☆23Aug 20, 2026Updated last week
- A wrapper to identify, bin, classify, and predict host-viral relationship for viruses☆92Dec 27, 2024Updated last year
- Fast, robust ANI and aligned fraction for (metagenomic) genomes and contigs.☆263May 13, 2026Updated 3 months ago
- DeepECtransformer☆33Oct 20, 2023Updated 2 years ago
- More scalable dereplication for metagenome assembled genomes☆87Aug 3, 2026Updated 3 weeks ago
- Taxonomic classification of viruses at Order and Family level☆21Mar 1, 2023Updated 3 years ago
- alignment-free coverage calculation for metagenomic binning >100 times faster☆56May 8, 2026Updated 3 months ago
- Snakemake pipeline for simulating shotgun metagenomic samples☆32Mar 13, 2026Updated 5 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Latest MOCAT2 version☆18Mar 8, 2021Updated 5 years ago
- ☆16Jan 28, 2026Updated 7 months ago
- Robust individual and aggregate checksums for nucleotide sequences☆18Mar 3, 2026Updated 5 months ago
- Reference Phylogeny for Bacterial and Archaeal Genomes☆25Aug 9, 2025Updated last year
- Utility to analyse a group of closely related MAgs/Genomes/bins/SUBs of more or less dubious origin☆15Sep 24, 2024Updated last year
- PhaTYP: Predicting lifestyle for bacteriophages using BERT☆19Nov 6, 2024Updated last year
- A simple program to classify the lifestyle of phages.☆18May 22, 2023Updated 3 years ago