nf-core / pangenome
Renders a collection of sequences into a pangenome graph. https://doi.org/10.1093/bioinformatics/btae609.
☆85Updated last month
Alternatives and similar repositories for pangenome:
Users that are interested in pangenome are comparing it to the libraries listed below
- Pangenome-based genome inference☆127Updated 2 weeks ago
- Panacus is a tool for computing statistics for GFA-formatted pangenome graphs☆99Updated last week
- High-precision TE Annotator☆105Updated 3 weeks ago
- Research release basecalling models and configurations☆107Updated 9 months ago
- source code for EVM☆109Updated 3 months ago
- A list of software for pangenomics☆107Updated 3 weeks ago
- Constructing a pangenome gene graph☆184Updated 8 months ago
- cDNA read preprocessing☆65Updated 8 months ago
- List of genome assembly tools☆61Updated 3 weeks ago
- Wally: Visualization of aligned sequencing reads and contigs☆113Updated 3 months ago
- Phased assembly variant caller☆112Updated 3 months ago
- A tool for somatic structural variant calling using long reads☆117Updated 2 weeks ago
- a Bioinformatics Application for Navigating De novo Assembly Graphs Easily