☆167Jan 22, 2026Updated 3 months ago
Alternatives and similar repositories for wf-human-variation
Users that are interested in wf-human-variation are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆21Nov 24, 2025Updated 5 months ago
- A bioinformatics tool for working with modified bases☆265Apr 29, 2026Updated last week
- ☆51Apr 10, 2026Updated 3 weeks ago
- A tool for somatic structural variant calling using long reads☆169Apr 9, 2026Updated 3 weeks ago
- Clair3 - Symphonizing pileup and full-alignment for deep learning-based long-read variant calling☆359Updated this week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Copy number caller for long read data including SNV utilization☆69Mar 31, 2025Updated last year
- ☆13May 2, 2025Updated last year
- Oxford Nanopore's Basecaller☆822Feb 19, 2026Updated 2 months ago
- Structural variation caller using third generation sequencing☆651Apr 2, 2026Updated last month
- ☆32Mar 9, 2026Updated 2 months ago
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆39Mar 25, 2026Updated last month
- ☆52Jun 25, 2024Updated last year
- ☆53Sep 27, 2025Updated 7 months ago
- SV detection tool for nanopore sequence reads☆97Mar 25, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing☆39Nov 28, 2025Updated 5 months ago
- Tandem repeat genotyping and visualization from PacBio HiFi data☆136Dec 8, 2025Updated 5 months ago
- Structural variant caller for low-depth long-read sequencing data☆49Feb 5, 2026Updated 3 months ago
- Structural variant toolkit for VCFs☆407Mar 21, 2026Updated last month
- ☆112Nov 24, 2025Updated 5 months ago
- Nanopore raw signal repeat detection pipeline☆45Mar 17, 2023Updated 3 years ago
- Toolkit for calling structural variants using short or long reads☆115Apr 28, 2026Updated last week
- TRGT Repeat expansion summary☆10Apr 10, 2023Updated 3 years ago
- MethPhaser: methylation-based haplotype phasing of human genomes☆54Mar 5, 2025Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆12Apr 18, 2022Updated 4 years ago
- A nextflow pipeline for analysing expression and splicing in RNA seq data from rare disease patient☆18Apr 1, 2026Updated last month
- ☆128Apr 18, 2026Updated 2 weeks ago
- Tandem repeat genotyping from long reads☆21Apr 5, 2026Updated last month
- Tools for plotting methylation data in various ways☆189Mar 24, 2026Updated last month
- ClairS-TO - a deep-learning method for tumor-only somatic variant calling☆90Apr 28, 2026Updated last week
- Tandem repeat expansion detection or genotyping from long-read alignments☆154Mar 25, 2026Updated last month
- Short Tandem Repeat disease loci resource☆29Updated this week
- ☆27Nov 14, 2025Updated 5 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Annotation and Ranking of Structural Variation☆295Apr 16, 2026Updated 3 weeks ago
- An online database of variants functionally demonstrated to affect (or not affect) splicing.☆11Apr 28, 2026Updated last week
- A *fast* tool for BAM/CRAM quality evaluation, intended for long reads☆182Updated this week
- Tool to annotate outfiles from ExpansionHunter and TRGT with the pathologic implications of the repeat☆41Apr 22, 2026Updated 2 weeks ago
- PEPPER-Margin-DeepVariant☆258Jan 12, 2024Updated 2 years ago
- Clair3-Trio: variant calling in trio using Nanopore long-reads☆16Apr 18, 2024Updated 2 years ago
- A short tandem repeat (STR) genotyping and analysis toolkit for long reads☆18Updated this week