☆176Jul 20, 2026Updated last week
Alternatives and similar repositories for wf-human-variation
Users that are interested in wf-human-variation are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆22Nov 24, 2025Updated 8 months ago
- Clair3 - Symphonizing pileup and full-alignment for deep learning-based long-read variant calling☆383Jul 9, 2026Updated 2 weeks ago
- A bioinformatics tool for working with modified bases☆271Jul 14, 2026Updated 2 weeks ago
- ☆52Apr 10, 2026Updated 3 months ago
- Oxford Nanopore's Basecaller☆854Jul 22, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆34Mar 9, 2026Updated 4 months ago
- A tool for somatic structural variant calling using long reads☆174Jun 8, 2026Updated last month
- Copy number caller for long read data including SNV utilization☆69Mar 31, 2025Updated last year
- MethPhaser: methylation-based haplotype phasing of human genomes☆56Mar 5, 2025Updated last year
- ☆27Nov 14, 2025Updated 8 months ago
- Structural variation caller using third generation sequencing☆673Jul 20, 2026Updated last week
- A structural variant filtering and prioritization tool for long-read sequencing data☆46Jul 21, 2026Updated last week
- Short Tandem Repeat disease loci resource☆29Updated this week
- ☆14May 2, 2025Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Workflow to annotate SNVs, indels, and structural variants☆17May 13, 2025Updated last year
- Tandem repeat expansion detection or genotyping from long-read alignments☆165Mar 25, 2026Updated 4 months ago
- Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing☆40May 19, 2026Updated 2 months ago
- Structural variant toolkit for VCFs☆420May 22, 2026Updated 2 months ago
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆39Mar 25, 2026Updated 4 months ago
- Tandem repeat genotyping and visualization from PacBio HiFi data☆141Jun 10, 2026Updated last month
- ☆52Jun 25, 2024Updated 2 years ago
- Long read based human genomic structural variation detection with cuteSV☆291Jul 12, 2026Updated 2 weeks ago
- SV detection tool for nanopore sequence reads☆98Mar 25, 2026Updated 4 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆129Jul 22, 2026Updated last week
- ☆52Sep 27, 2025Updated 10 months ago
- ClairS-TO - a deep-learning method for tumor-only somatic variant calling☆92Jul 1, 2026Updated 3 weeks ago
- Structural variant caller for low-depth long-read sequencing data☆49Feb 5, 2026Updated 5 months ago
- Methylation/modified base calling separated from basecalling.☆188Sep 17, 2024Updated last year
- A *fast* tool for BAM/CRAM quality evaluation, intended for long reads☆187Jul 1, 2026Updated 3 weeks ago
- An analysis pipeline for long-reads from both PacBio and Oxford Nanopore Technologies (ONT), written in Nextflow.☆69Updated this week
- Tools for plotting methylation data in various ways☆194Jun 13, 2026Updated last month
- Toolkit for calling structural variants using short or long reads☆115Jul 14, 2026Updated 2 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- HiFi-based caller for highly similar paralogous genes☆72Updated this week
- ☆19Oct 20, 2025Updated 9 months ago
- Nanopore raw signal repeat detection pipeline☆45Mar 17, 2023Updated 3 years ago
- Haplotype-specific somatic copy number aberrations/profiling from long reads sequencing data☆82Updated this week
- PEPPER-Margin-DeepVariant☆259Jan 12, 2024Updated 2 years ago
- ☆85Mar 3, 2025Updated last year
- Tandem repeat genotyping from long reads☆26Jul 2, 2026Updated 3 weeks ago