epi2me-labs / wf-human-variationLinks
☆130Updated last week
Alternatives and similar repositories for wf-human-variation
Users that are interested in wf-human-variation are comparing it to the libraries listed below
Sorting:
- A bioinformatics tool for working with modified bases☆202Updated 3 weeks ago
- pbsv - PacBio structural variant (SV) calling and analysis tools☆154Updated 4 months ago
- ☆98Updated 3 weeks ago
- Tools for plotting methylation data in various ways☆155Updated 3 weeks ago
- Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data☆114Updated 3 years ago
- A tool for somatic structural variant calling using long reads☆138Updated last week
- Workflows and tutorials for LongRead analysis with specific focus on Oxford Nanopore data☆141Updated 3 years ago
- A structural variation pipeline for short-read sequencing☆189Updated this week
- Jasmine: SV Merging Across Samples☆217Updated 6 months ago
- Full-Length Alternative Isoform analysis of RNA☆230Updated last week
- accurate LiftOver tool for new genome assemblies☆132Updated 11 months ago
- Research release basecalling models and configurations☆113Updated last month
- Detection of RNA modifications from Oxford Nanopore direct RNA sequencing reads (Liu*, Begik* et al., Nature Comm 2019)☆115Updated last week
- Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics☆114Updated last week
- LongQC is a tool for the data quality control of the PacBio and ONT long reads.☆170Updated last year
- ☆123Updated 8 months ago
- Iso-Seq - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads☆215Updated last week
- Pipeline for differential gene expression (DGE) and differential transcript usage (DTU) analysis using long reads☆108Updated 2 years ago
- A minimap2 frontend for PacBio native data formats☆201Updated 4 months ago
- An ultra-fast and efficient genomic tool for coverage calculation☆152Updated 3 months ago
- Structural Variant Identification Method using Long Reads☆172Updated 4 years ago
- Dfam Transposable Element Tools Docker container.☆95Updated 2 weeks ago
- SALSA: A tool to scaffold long read assemblies with Hi-C data☆187Updated last year
- A tool to identify, orient, trim and rescue full length cDNA reads☆82Updated 3 years ago
- BAM Statistics, Feature Counting and Annotation☆150Updated 3 weeks ago
- Whole Genome Alignment Tools☆202Updated last month
- Nanopore RNA-Seq data from the Singapore Nanopore-Expression Project☆129Updated last week
- Transcript discovery and quantification with long RNA reads (Nanopores and PacBio)☆169Updated this week
- Script to automatically create and run IGV snapshot batchscripts☆141Updated 2 years ago
- Nanopore demultiplexing, QC and alignment pipeline☆203Updated last week