OpenGene / fastplongLinks
Ultra-fast preprocessing and quality control for long-read sequencing data
☆149Updated 3 weeks ago
Alternatives and similar repositories for fastplong
Users that are interested in fastplong are comparing it to the libraries listed below
Sorting:
- ☆211Updated 5 months ago
- Workflows and tutorials for LongRead analysis with specific focus on Oxford Nanopore data☆139Updated 3 years ago
- Eukaryotic Genome Annotation Pipeline-External caller scripts and documentation☆141Updated 3 weeks ago
- Fast and accurately polish the genome generated by long reads.☆226Updated 5 months ago
- ☆198Updated 2 months ago
- Any Way to Show Multi genomic Synteny☆194Updated 2 months ago
- An ultra-fast and efficient genomic tool for coverage calculation☆150Updated 3 months ago
- Generate an interactive dot plot from mummer or minimap alignments☆203Updated last year
- Tool to plot synteny and structural rearrangements between genomes☆308Updated 2 months ago
- A tool for generating consensus long-read assemblies for bacterial genomes☆144Updated this week
- A bioinformatics tool for working with modified bases☆198Updated last week
- Earl Grey: A fully automated TE curation and annotation pipeline☆171Updated this week
- Benchmarking of long-read assembly tools for bacterial whole genomes☆171Updated 4 years ago
- Version 5 of the CAFE phylogenetics software☆134Updated 4 months ago
- ☆126Updated 2 weeks ago
- Transcriptome Annotation by Modular Algorithms (for long read RNA sequencing data)☆152Updated 2 years ago
- Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data☆154Updated last week
- A minimap2 frontend for PacBio native data formats☆197Updated 4 months ago
- LongQC is a tool for the data quality control of the PacBio and ONT long reads.☆169Updated last year
- FunGAP: fungal Genome Annotation Pipeline☆111Updated 2 weeks ago
- ☆95Updated this week
- Find, circularise and annotate mitogenome from PacBio assemblies☆183Updated last month
- accurate LiftOver tool for new genome assemblies☆129Updated 10 months ago
- PacBio Secondary Analysis Tools on Bioconda. Contains list of PacBio packages available via conda.☆270Updated 4 months ago
- Filtering and trimming of long read sequencing data☆206Updated 2 years ago
- Nanopore data assembler☆156Updated 3 years ago
- (Not Offical) BBMap short read aligner, and other bioinformatic tools.☆234Updated 4 years ago
- Research release basecalling models and configurations☆113Updated last month
- 3D de novo assembly (3D DNA) pipeline☆212Updated last year
- Metagenomic classification of long-read sequencing data☆85Updated last month