nanoporetech / rerio
Research release basecalling models and configurations
☆102Updated 3 months ago
Related projects: ⓘ
- Tandem repeat genotyping and visualization from PacBio HiFi data☆100Updated this week
- A tool to identify, orient, trim and rescue full length cDNA reads☆78Updated 2 years ago
- A *fast* tool for BAM/CRAM quality evaluation, intended for long reads☆124Updated 4 months ago
- pbsv - PacBio structural variant (SV) calling and analysis tools☆125Updated last year
- A tool for somatic structural variant calling using long reads☆99Updated this week
- ☆139Updated last week
- Wally: Visualization of aligned sequencing reads and contigs☆106Updated 7 months ago
- ☆32Updated this week
- Variant calling tool for long-read sequencing data☆98Updated 4 months ago
- Pangenome-based genome inference☆103Updated last week
- Visualise and analyse nanopore (ONT) raw signals☆108Updated last week
- A bioinformatics tool for working with modified bases☆130Updated this week
- Lima - Demultiplex Barcoded PacBio Samples☆65Updated 9 months ago
- GraffiTE is a pipeline that finds polymorphic transposable elements in genome assemblies and/or long reads, and genotypes the discovered …☆106Updated last week
- Pipeline to convert a haploid assembly into diploid☆89Updated 3 months ago
- ☆69Updated this week
- A complete diploid human genome☆91Updated last week
- Stratification BED files from the Global Alliance for Genomics and Health (GA4GH) Benchmarking Team and the Genome in a Bottle Consortium…☆75Updated last year
- Constructing a pangenome gene graph☆168Updated 2 months ago
- ☆36Updated this week
- Comparison of multiple long read datasets☆103Updated 3 months ago
- Same species annotation lift over pipeline.☆95Updated last year
- Evaluation and polishing workflows for T2T genome assemblies☆100Updated 3 weeks ago
- Tools to annotate genomes using long read transcriptomics data☆45Updated 3 years ago
- ☆111Updated 2 weeks ago
- a Bioinformatics Application for Navigating De novo Assembly Graphs Easily☆112Updated last month
- Dfam Transposable Element Tools Docker container.☆82Updated this week
- Yet another k-mer analyzer☆112Updated 5 months ago
- Snakemake pipelines for nanopore sequencing data archiving and processing☆88Updated 2 years ago
- accurate LiftOver tool for new genome assemblies☆106Updated last month