nanoporetech / rerioLinks
Research release basecalling models and configurations
☆117Updated 7 months ago
Alternatives and similar repositories for rerio
Users that are interested in rerio are comparing it to the libraries listed below
Sorting:
- Visualise and analyse nanopore (ONT) raw signals☆126Updated last month
- A tool to identify, orient, trim and rescue full length cDNA reads☆83Updated 3 years ago
- Wally: Visualization of aligned sequencing reads and contigs☆120Updated 3 months ago
- Tandem repeat genotyping and visualization from PacBio HiFi data☆129Updated last month
- Collection of tools for the analysis of CpG data☆102Updated 6 months ago
- Constructing a pangenome gene graph☆203Updated 5 months ago
- A tool for somatic structural variant calling using long reads☆160Updated 2 months ago
- Snakemake pipelines for nanopore sequencing data archiving and processing☆91Updated 3 years ago
- Structural Variant Identification Method using Genome Assemblies☆132Updated 3 years ago
- Pangenome-based genome inference☆153Updated last month
- RNA modifications detection from Nanopore dRNA-Seq data☆88Updated last week
- Variant calling tool for long-read sequencing data☆116Updated 9 months ago
- ☆81Updated 5 years ago
- A list of software for pangenomics☆165Updated last week
- A *fast* tool for BAM/CRAM quality evaluation, intended for long reads☆164Updated last week
- Dfam Transposable Element Tools Docker container.☆101Updated last month
- ☆121Updated 2 months ago
- Yet another k-mer analyzer☆158Updated 2 weeks ago
- Python programs for processing GFF3 files☆102Updated last month
- LongQC is a tool for the data quality control of the PacBio and ONT long reads.☆178Updated 2 years ago
- accurate LiftOver tool for new genome assemblies☆146Updated last year
- GenMap - Fast and Exact Computation of Genome Mappability☆113Updated last year
- Read Until client library for Nanopore Sequencing☆107Updated last year
- Pipeline to convert a haploid assembly into diploid☆109Updated 11 months ago
- A fast whole-genome aligner based on de Bruijn graphs☆156Updated 6 months ago
- Plotting tools for nanopore methylation data☆95Updated 5 months ago
- Create statistic summary of an Oxford Nanopore read dataset☆128Updated 3 years ago
- Long read aligner☆115Updated 2 years ago
- Tools for plotting methylation data in various ways☆166Updated last month
- ☆47Updated last month