lbcb-sci / raconLinks
Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads
☆225Updated last year
Alternatives and similar repositories for racon
Users that are interested in racon are comparing it to the libraries listed below
Sorting:
- Nanopore data assembler☆156Updated 3 years ago
- Fast and accurately polish the genome generated by long reads.☆226Updated 5 months ago
- ☆198Updated 2 months ago
- Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads. http://genome.cshlp.org/content/early/2017/01/18/gr…☆283Updated last year
- Jasmine: SV Merging Across Samples☆216Updated 6 months ago
- haplotypic duplication identification tool☆247Updated last year
- LongQC is a tool for the data quality control of the PacBio and ONT long reads.☆169Updated last year
- Filtering and trimming of long read sequencing data☆206Updated 2 years ago
- A simple and fast metassembler and assembly gap filler designed for long molecule based assemblies.☆204Updated 2 years ago
- k-mer based assembly evaluation☆314Updated 11 months ago
- Comparison of multiple long read datasets☆134Updated last month
- pycoQC computes metrics and generates Interactive QC plots from the sequencing summary report generated by Oxford Nanopore technologies b…☆280Updated 8 months ago
- RaGOO is no longer supported. Please use RagTag instead: https://github.com/malonge/RagTag☆173Updated 4 years ago
- Find, circularise and annotate mitogenome from PacBio assemblies☆183Updated last month
- De novo genome assembler for long uncorrected reads☆223Updated last year
- Transcriptome Annotation by Modular Algorithms (for long read RNA sequencing data)☆152Updated 2 years ago
- A tool to circularize genome assemblies☆242Updated last year
- SALSA: A tool to scaffold long read assemblies with Hi-C data☆185Updated last year
- Research release basecalling models and configurations☆113Updated last month
- A genome completeness evaluation tool based on miniprot☆213Updated last month
- Long read / genome alignment software☆289Updated 7 months ago
- Generate an interactive dot plot from mummer or minimap alignments☆203Updated last year
- base-accurate DNA sequence alignments using WFA and mashmap3☆191Updated 2 weeks ago
- Processing pipeline for pan-genome visulization and exploration☆139Updated last year
- An overview of all nanopack tools☆257Updated 2 years ago
- Ultra-fast de novo assembler using long noisy reads☆135Updated 4 years ago
- Workflows and tutorials for LongRead analysis with specific focus on Oxford Nanopore data☆139Updated 3 years ago
- pbsv - PacBio structural variant (SV) calling and analysis tools☆152Updated 4 months ago
- ALLHiC: phasing and scaffolding polyploid genomes based on Hi-C data☆177Updated 8 months ago
- Tool to plot synteny and structural rearrangements between genomes☆308Updated 2 months ago