Plotting scripts for long read sequencing data
☆560Aug 18, 2026Updated last week
Alternatives and similar repositories for NanoPlot
Users that are interested in NanoPlot are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Neural-network consensus polishing and variant calling for Oxford Nanopore sequencing data☆523May 20, 2026Updated 3 months ago
- pycoQC computes metrics and generates Interactive QC plots from the sequencing summary report generated by Oxford Nanopore technologies b…☆284Oct 18, 2024Updated last year
- adapter trimmer for Oxford Nanopore reads☆387May 8, 2024Updated 2 years ago
- quality filtering tool for long reads☆413Sep 17, 2025Updated 11 months ago
- Comparison of multiple long read datasets☆180Aug 3, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Create statistic summary of an Oxford Nanopore read dataset☆137Nov 4, 2022Updated 3 years ago
- Filtering and trimming of long read sequencing data☆219Jan 16, 2023Updated 3 years ago
- Quality control for MinION sequencing data☆221Mar 17, 2026Updated 5 months ago
- De novo assembler for single molecule sequencing reads using repeat graphs☆950Apr 3, 2026Updated 4 months ago
- Structural variation caller using third generation sequencing☆676Jul 20, 2026Updated last month
- Signal-level algorithms for MinION data☆600Aug 5, 2023Updated 3 years ago
- ☆259Aug 3, 2026Updated 3 weeks ago
- A versatile pairwise aligner for genomic and spliced nucleotide sequences☆2,242May 19, 2026Updated 3 months ago
- Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads. http://genome.cshlp.org/content/early/2017/01/18/gr …☆302May 9, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- LongQC is a tool for the data quality control of the PacBio and ONT long reads.☆186Mar 25, 2026Updated 5 months ago
- An overview of all nanopack tools☆290Jun 2, 2023Updated 3 years ago
- Oxford Nanopore's Basecaller☆867Updated this week
- Clair3 - Symphonizing pileup and full-alignment for deep learning-based long-read variant calling☆387Jul 9, 2026Updated last month
- Quality control tools for nanopore sequencing data☆114Oct 26, 2024Updated last year
- Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads☆242Dec 29, 2023Updated 2 years ago
- Long read based human genomic structural variation detection with cuteSV☆292Aug 21, 2026Updated last week
- k-mer based assembly evaluation☆354Jul 6, 2026Updated last month
- NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on r…☆310Mar 18, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A single molecule sequence assembler for genomes large and small.☆708Jun 18, 2026Updated 2 months ago
- A tool for generating consensus long-read assemblies for bacterial genomes☆348Jul 24, 2026Updated last month
- Long read aligner☆115May 26, 2023Updated 3 years ago
- Long read / genome alignment software☆330Dec 16, 2025Updated 8 months ago
- De novo genome assembler for long uncorrected reads☆233Nov 15, 2023Updated 2 years ago
- Fast and accurate de novo assembler for long reads☆406May 10, 2024Updated 2 years ago
- Megalodon is a research command line tool to extract high accuracy modified base and sequence variant calls from raw nanopore reads by a…☆205May 4, 2023Updated 3 years ago
- a long read simulator that can imitate many types of read problems☆297Jul 24, 2026Updated last month
- A *fast* tool for BAM/CRAM quality evaluation, intended for long reads☆189Aug 17, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Assemble bacterial isolate genomes from Nanopore reads☆136Jan 22, 2025Updated last year
- Minimal but speedy quality control for nanopore reads in Rust☆139Sep 16, 2024Updated last year
- Read-based phasing of genomic variants, also called haplotype assembly☆425Jul 4, 2026Updated last month
- Nanopore sequence read simulator☆311Mar 12, 2026Updated 5 months ago
- hybrid assembly pipeline for bacterial genomes☆651Jul 29, 2026Updated last month
- Tombo is a suite of tools primarily for the identification of modified nucleotides from raw nanopore sequencing data.☆232May 4, 2023Updated 3 years ago
- Plotting tools for nanopore methylation data☆96Updated this week