Plotting scripts for long read sequencing data
☆557Aug 3, 2026Updated last week
Alternatives and similar repositories for NanoPlot
Users that are interested in NanoPlot are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Sequence correction provided by ONT Research☆520May 20, 2026Updated 2 months ago
- pycoQC computes metrics and generates Interactive QC plots from the sequencing summary report generated by Oxford Nanopore technologies b…☆288Oct 18, 2024Updated last year
- adapter trimmer for Oxford Nanopore reads☆385May 8, 2024Updated 2 years ago
- quality filtering tool for long reads☆412Sep 17, 2025Updated 10 months ago
- Comparison of multiple long read datasets☆179Aug 3, 2026Updated last week
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Create statistic summary of an Oxford Nanopore read dataset☆137Nov 4, 2022Updated 3 years ago
- Filtering and trimming of long read sequencing data☆218Jan 16, 2023Updated 3 years ago
- Quality control for MinION sequencing data☆221Mar 17, 2026Updated 4 months ago
- De novo assembler for single molecule sequencing reads using repeat graphs☆949Apr 3, 2026Updated 4 months ago
- Structural variation caller using third generation sequencing☆672Jul 20, 2026Updated 3 weeks ago
- Signal-level algorithms for MinION data☆600Aug 5, 2023Updated 3 years ago
- ☆261Aug 3, 2026Updated last week
- A versatile pairwise aligner for genomic and spliced nucleotide sequences☆2,230May 19, 2026Updated 2 months ago
- Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads. http://genome.cshlp.org/content/early/2017/01/18/gr…☆300May 9, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- LongQC is a tool for the data quality control of the PacBio and ONT long reads.☆185Mar 25, 2026Updated 4 months ago
- An overview of all nanopack tools☆292Jun 2, 2023Updated 3 years ago
- Oxford Nanopore's Basecaller☆859Jul 30, 2026Updated last week
- Clair3 - Symphonizing pileup and full-alignment for deep learning-based long-read variant calling☆387Jul 9, 2026Updated last month
- Quality control tools for nanopore sequencing data☆114Oct 26, 2024Updated last year
- Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads☆241Dec 29, 2023Updated 2 years ago
- Long read based human genomic structural variation detection with cuteSV☆292Jul 30, 2026Updated last week
- k-mer based assembly evaluation☆351Jul 6, 2026Updated last month
- NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on r…☆310Mar 18, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A single molecule sequence assembler for genomes large and small.☆707Jun 18, 2026Updated last month
- A tool for generating consensus long-read assemblies for bacterial genomes☆347Jul 24, 2026Updated 2 weeks ago
- Long read aligner☆115May 26, 2023Updated 3 years ago
- Long read / genome alignment software☆329Dec 16, 2025Updated 7 months ago
- De novo genome assembler for long uncorrected reads☆232Nov 15, 2023Updated 2 years ago
- Fast and accurate de novo assembler for long reads☆405May 10, 2024Updated 2 years ago
- Megalodon is a research command line tool to extract high accuracy modified base and sequence variant calls from raw nanopore reads by a…☆205May 4, 2023Updated 3 years ago
- a long read simulator that can imitate many types of read problems☆297Jul 24, 2026Updated 2 weeks ago
- A *fast* tool for BAM/CRAM quality evaluation, intended for long reads☆188Aug 3, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Assemble bacterial isolate genomes from Nanopore reads☆136Jan 22, 2025Updated last year
- Minimal but speedy quality control for nanopore reads in Rust☆139Sep 16, 2024Updated last year
- Read-based phasing of genomic variants, also called haplotype assembly☆423Jul 4, 2026Updated last month
- Nanopore sequence read simulator☆308Mar 12, 2026Updated 4 months ago
- hybrid assembly pipeline for bacterial genomes☆649Jul 29, 2026Updated last week
- Tombo is a suite of tools primarily for the identification of modified nucleotides from raw nanopore sequencing data.☆232May 4, 2023Updated 3 years ago
- Plotting tools for nanopore methylation data☆95Aug 3, 2026Updated last week