Registries for biological ontologies.
☆25Apr 23, 2026Updated last week
Alternatives and similar repositories for bionty
Users that are interested in bionty are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Shadow objects for AnnData and MuData (experimental)☆11Feb 28, 2025Updated last year
- Read fcs files.☆11Nov 13, 2025Updated 5 months ago
- a dataloader to work with large single cell datasets from lamindb☆40Apr 10, 2026Updated 3 weeks ago
- Open-source data framework for biology. Context and memory for datasets and models at scale. Query, trace & validate with a lineage-nativ…☆260Updated this week
- Registry for scverse ecosystem packages☆36Apr 28, 2026Updated last week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Genomic Features in Python from BioConductor's AnnotationHub☆23Apr 27, 2026Updated last week
- SuperCell for Cytometry data☆13Oct 14, 2025Updated 6 months ago
- Code and documentation for the curation of cellxgene datasets☆54Updated this week
- AnnData interoperability in R☆171Apr 28, 2026Updated last week
- Multimodal Data (.h5mu) implementation for Python☆120Updated this week
- Minibatch loading for on-disk anndata files, co-developed by Lamin Labs and scverse☆55Updated this week
- Distributed single-cell data analysis.☆39Apr 28, 2026Updated last week
- Store collections of experimental data based on TileDB☆12Apr 27, 2026Updated last week
- single-cell latent diffusion model☆49Apr 27, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Ultrafast method to compute single-sample gene set enrichment scores for gene expression or proteomics data☆24Updated this week
- Automatically annotate cell types, consistently across samples.☆20Updated this week
- Python API and Jupyter widget for Vitessce☆66Apr 17, 2026Updated 2 weeks ago
- Spatialproteomics is a light weight wrapper around xarray with the intention to facilitate the data exploration and analysis of highly mu…☆42Updated this week
- Build contrasts for models defined with formulaic☆12Apr 27, 2026Updated last week
- CZ CELLxGENE Discover Census☆121Jan 14, 2026Updated 3 months ago
- Accelerated, Python-only, single-cell integration benchmarking metrics☆91Apr 28, 2026Updated last week
- A collection of self-contained fsspec-based filesystems☆18Apr 27, 2026Updated last week
- Assign genotypes to Salmonella Paratyphi A isolates using their whole-genome data.☆10Mar 6, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Access public biological ontologies.☆14Aug 7, 2024Updated last year
- Flow & mass cytometry analytics.☆60Apr 27, 2026Updated last week
- ☆28Apr 15, 2026Updated 3 weeks ago
- Single-cell Lung Cancer Atlas with 1.2M cells☆92Jan 19, 2025Updated last year
- Matplotlib style for scientific publications☆14Apr 27, 2026Updated last week
- A fast dataloader for bigwig files made for machine learning☆29Dec 16, 2025Updated 4 months ago
- ☆12May 21, 2025Updated 11 months ago
- Slides and Notebooks for scverse 2024☆17Sep 24, 2024Updated last year
- Profiling epigenetic age in single cells☆45Dec 11, 2021Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- scPrisma is a spectral analysis method, for pseudotime reconstruction, informative genes inference, filtering, and enhancement of underly…☆19Mar 31, 2024Updated 2 years ago
- ☆16Sep 8, 2024Updated last year
- A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to repr…☆245Mar 14, 2026Updated last month
- Code repository for the snRNA-seq cross-tissue atlas project☆21Feb 22, 2022Updated 4 years ago
- ☆15Apr 7, 2026Updated 3 weeks ago
- Python and R SOMA APIs using TileDB’s cloud-native format. Ideal for single-cell data at any scale.☆124Apr 24, 2026Updated last week
- Deep Generative Modeling of RNA Velocity☆38Oct 21, 2025Updated 6 months ago