☆16Apr 7, 2026Updated 3 months ago
Alternatives and similar repositories for geome
Users that are interested in geome are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Build contrasts for models defined with formulaic☆13Updated this week
- High-Performance Sparse Matrix Library☆19Nov 23, 2025Updated 8 months ago
- ☆21Jul 10, 2026Updated 2 weeks ago
- Fast array utilities☆15Updated this week
- ☆18May 15, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A collection of project templates and useful functions for single-cell data analysis with Scanpy.☆21Jun 12, 2023Updated 3 years ago
- Shadow objects for AnnData and MuData (experimental)☆11Feb 28, 2025Updated last year
- A Python toolkit for setting up benchmarking dataset using biomedical networks☆22Jul 13, 2026Updated last week
- Code for the analysis performed in the paper "Transcription factor stoichiometry, motif affinity and syntax regulate single-cell chromati…☆14Oct 16, 2025Updated 9 months ago
- Official Implementation of Multi-Masked Aggregators for Graph Neural Networks in Pytorch and PyTorch Geometric☆11Mar 24, 2023Updated 3 years ago
- A Python toolkit for subcellular analysis of spatial transcriptomics data☆89Nov 16, 2025Updated 8 months ago
- Drug-Target Interaction Prediction Using Convolutional Neural Networks By Images of Compounds☆10Jun 16, 2020Updated 6 years ago
- Scalable framework for integrating single-cell omics with genetic data using AnnData.☆20Jul 14, 2026Updated last week
- A multi-dimensional spatial image data structure for scientific Python.☆44Aug 8, 2025Updated 11 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Optimal gating strategies for flow and mass cytometry.☆16Updated this week
- Simple scVI implementation☆13Jul 13, 2026Updated last week
- GraphCompass: Graph Comparison Tools for Differential Analyses in Spatial Systems☆39Jul 11, 2025Updated last year
- Official Implementation of Graph Mixer Networks☆19Dec 5, 2023Updated 2 years ago
- https://sparrow-pipeline.readthedocs.io/en/latest/☆34Updated this week
- Access public biological ontologies.☆14Aug 7, 2024Updated last year
- Flow & mass cytometry analytics.☆61Updated this week
- A CodecPipeline for zarr-python backed by the zarrs Rust crate☆74Updated this week
- Configure Vitessce using existing Scverse plotting APIs☆25Jul 17, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆13Aug 9, 2022Updated 3 years ago
- ☆19Dec 15, 2023Updated 2 years ago
- Static plotting for spatialdata☆82Jul 10, 2026Updated 2 weeks ago
- HiDeF (Hierarchical community Decoding Framework)☆15Jan 30, 2024Updated 2 years ago
- Single-cell spatial omics analysis that makes you happy!☆70Updated this week
- ProtFeat is protein feature extraction tool that utilizes POSSUM and iFeature.☆20Sep 16, 2024Updated last year
- Unsupervised Deep Disentangled Representation of Single-Cell Omics☆72Updated this week
- ☆35Oct 4, 2024Updated last year
- A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simul…☆17Aug 9, 2025Updated 11 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- numcodecs Rust API for buffer compression☆14Updated this week
- ☆17Oct 17, 2024Updated last year
- Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery☆28May 16, 2021Updated 5 years ago
- Parse ArchR arrow files to anndata h5ad☆16Dec 14, 2023Updated 2 years ago
- Toolbox for single-cell data analysis on sample level☆25Updated this week
- A python package for chromVAR☆34May 1, 2023Updated 3 years ago
- Tutorials for multimodal omics data analysis☆20Feb 28, 2025Updated last year