A fast dataloader for bigwig files made for machine learning
☆29Dec 16, 2025Updated 10 months ago
Alternatives and similar repositories for bigwig-loader
Users that are interested in bigwig-loader are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆25Aug 20, 2024Updated 2 years ago
- Toolset for training quantitative sequence to function models.☆23Mar 15, 2024Updated 2 years ago
- ☆18Oct 21, 2024Updated 2 years ago
- ☆53Mar 22, 2026Updated 7 months ago
- Blog page for the Genomics x AI community☆16Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Build contrasts for models defined with formulaic☆13Oct 19, 2026Updated last week
- Machine learning methods for DNA sequence analysis.☆66Sep 30, 2026Updated 3 weeks ago
- Pytorch implementation of the Borzoi model from Calico, and Flashzoi, a 3x faster Borzoi enhancement.☆100Jun 10, 2026Updated 4 months ago
- Container class to represent genomic locations and support genomic analysis☆28Updated this week
- Access public biological ontologies.☆14Aug 7, 2024Updated 2 years ago
- Enformer Celltyping is a tensorflow, multi-headed attention based model that incorporates distal effects of Deoxyribonucleic Acid (DNA) i…☆19Jun 25, 2025Updated last year
- Benchmarking DNA Language Models on Biologically Meaningful Tasks☆135Oct 31, 2024Updated last year
- Evolution-inspired data augmentations for PyTorch-based models for regulatory genomics☆25Jun 3, 2025Updated last year
- Code accompanying the paper "Deciphering regulatory DNA sequences and noncoding genetic variants using neural network models of massively…☆13May 9, 2026Updated 5 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Template and examples for using Gosling.js and its API in React App☆11Jun 26, 2025Updated last year
- Phenotype detection in pooled genetic perturbation screens☆12Mar 13, 2024Updated 2 years ago
- Flexible analysis of high-content CRISPR screening☆36Sep 14, 2026Updated last month
- Toolkit for training hyenaDNA-based autoregressive language models on DNA sequences.☆52Oct 4, 2024Updated 2 years ago
- A lite implementation of tfmodisco, a motif discovery algorithm for genomics experiments.☆94Oct 17, 2026Updated last week
- An R package for working with LaminDB instances.☆11Oct 21, 2026Updated last week
- ☆14Jan 23, 2025Updated last year
- GAME was designed for the functional genomics community to create seamless communication across pre-trained models and genomics datasets.…☆23Updated this week
- A lightweight reimplementation of some of the algorithms in the MEME suite in Python.☆39Sep 29, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Weakly supervised learning uncovers phenotypic signatures in single-cell data☆42Jun 7, 2026Updated 4 months ago
- Code for improving the performance of sequence-to-expression models for making individual-specific gene expression predictions by fine-tu…☆20Mar 15, 2026Updated 7 months ago
- ☆14Sep 1, 2024Updated 2 years ago
- Biological sequence analysis for the modern age.☆329Oct 20, 2026Updated last week
- Downloader for ENCODE☆32Oct 5, 2020Updated 6 years ago
- An efficient tool for large-scale correlation network analysis☆15Dec 27, 2024Updated last year
- RNA-seq prediction with deep convolutional neural networks.☆268Sep 30, 2026Updated 3 weeks ago
- A Python library for fast and easy access to genomic resources such as sequence, data tracks, and annotations☆64Updated this week
- A command-line tool to mitigate homology-based data leakage in sequence-to-expression models☆26Jun 8, 2026Updated 4 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- PARM: Promoter Activity Regulatory Model☆27Jul 27, 2026Updated 3 months ago
- Manage biological ontologies.☆27Oct 7, 2026Updated 3 weeks ago
- ☆17Dec 3, 2025Updated 10 months ago
- DeepSEA implements in PyTorch☆25Jun 5, 2019Updated 7 years ago
- ☆25Feb 2, 2024Updated 2 years ago
- High-definition modeling of chromatin + transcriptomics data☆26Jan 27, 2026Updated 9 months ago
- Genomic Features in Python from BioConductor's AnnotationHub☆22Updated this week