CellArr / cellarrLinks
Store collections of experimental data based on TileDB
☆12Updated 2 weeks ago
Alternatives and similar repositories for cellarr
Users that are interested in cellarr are comparing it to the libraries listed below
Sorting:
- Fit generalized linear models in python.☆28Updated 2 years ago
- Nextflow pipeline to re-process all public single-cell RNA-seq data☆31Updated 7 months ago
- Finding the causality in biological pathways☆14Updated 2 years ago
- An interface for Nested Stochastic Block Model for single cell analysis☆36Updated 4 months ago
- Fast Inference of Networks from Directed Regulations☆22Updated 2 years ago
- ☆20Updated 4 years ago
- ☆29Updated 2 years ago
- Analysis steps to calculate RNA Velocity in Bulk RNA-Seq samples. Step by Step Guide.☆17Updated 6 years ago
- Picasso: a methods for embedding points in 2D in a way that respects distances while fitting a user-specified shape.☆72Updated 4 months ago
- ENHANCE: Accurate denoising of single-cell RNA-Seq data (Python implementation)☆14Updated 6 years ago
- Genomic Features in Python from BioConductor's AnnotationHub☆22Updated 2 weeks ago
- Companion repository to Lause, Berens & Kobak (2021): "Analytic Pearson residuals for normalization of single-cell RNA-seq UMI data", Gen…☆40Updated 3 years ago
- Beta-Poisson model for single-cell RNA-seq data analyses☆16Updated 7 years ago
- ☆12Updated 5 months ago
- ☆12Updated 2 years ago
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- PROGENY Python implementation☆12Updated 3 years ago
- ☆18Updated last year
- Maximum mean discrepancy comparisons for single cell profiling experiments☆19Updated 4 years ago
- ☆12Updated 2 years ago
- Deep exponential families for single-cell data.☆20Updated 3 weeks ago
- Dynamical systems methods for RNA velocity analysis☆24Updated 4 years ago
- Regulatory networks with Direct Information in python☆40Updated 2 years ago
- Single cell network synthesis toolkit☆23Updated 4 years ago
- scRNAseq integration with triplet neural networks☆41Updated last week
- Variant impact phenotyping using Perturb-seq☆10Updated last year
- Fast algorithms for GLM-PCA.☆14Updated 10 months ago
- Dimensionality reduction for single cell RNA-seq data☆36Updated 6 years ago
- epigenome analysis to rank transcription factors☆15Updated 6 years ago
- Snakemake workflow to benchmark scRNA-seq data simulators☆14Updated 3 years ago