bigomics / plaidLinks
Ultrafast method to compute single-sample gene set enrichment scores for gene expression or proteomics data
☆19Updated last month
Alternatives and similar repositories for plaid
Users that are interested in plaid are comparing it to the libraries listed below
Sorting:
- Paired Insertion Counting for snATAC-seq data☆19Updated 8 months ago
- R package for analysing meaningful differences in the numbers of cell populations from single-cell phenotypic data☆22Updated 4 months ago
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆22Updated 4 months ago
- R package for Flexible dot plots☆29Updated 3 years ago
- Comprehensive pipeline for donor demultiplexing in single cell☆24Updated last week
- Interactive visualisation of CellphoneDB results☆11Updated last year
- Visualizing Somatic Alterations of 10X Spatial Transcriptomics Data☆14Updated last year
- Single-cell Case Control Analysis☆52Updated last week
- Pipeline for Universal Mapping of ATAC-seq☆25Updated 4 months ago
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆39Updated 2 years ago
- Network construction Algorithm☆22Updated last year
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆38Updated 2 weeks ago
- UniverSC: a flexible cross-platform single-cell data processing pipeline☆46Updated last year
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 10 months ago
- Code related to scRNA analysis using the scAmpi workflow☆27Updated 2 weeks ago
- Vaeda method for computational doublet annotation☆18Updated last week
- ☆40Updated 5 months ago
- ☆33Updated last year
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆44Updated 4 years ago
- ☆25Updated 3 years ago
- Molecular interactions inference from single-cell multi-omics data☆30Updated 3 weeks ago
- ☆53Updated last year
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16Updated 3 years ago
- ☆20Updated 2 years ago
- scWGCNA☆61Updated 3 years ago
- ☆39Updated 4 years ago
- scSNV Mapping tool for 10X Single Cell Data☆25Updated last month
- Inferring gene co-expression networks from single cell gene expression data☆28Updated 3 years ago
- binned motif enrichment analysis and visualisation☆45Updated last week
- ☆25Updated 3 months ago