Ultrafast method to compute single-sample gene set enrichment scores for gene expression or proteomics data
☆21Feb 10, 2026Updated 2 months ago
Alternatives and similar repositories for plaid
Users that are interested in plaid are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Single-cell immune repertoire trajectory analysis in R☆12Aug 8, 2025Updated 8 months ago
- ☆14Oct 16, 2025Updated 5 months ago
- SuperCell for Cytometry data☆13Oct 14, 2025Updated 5 months ago
- Detecting TCR involved in immune responses from single RepSeq datasets☆27Jun 17, 2019Updated 6 years ago
- Methods to discover gene programs on single-cell data☆179Apr 1, 2026Updated last week
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- ☆11Jan 12, 2024Updated 2 years ago
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated 11 months ago
- Artisanal 🤣 bioinformatics tools and pipelines in Scala☆20Jan 28, 2020Updated 6 years ago
- R package for plotting 3D graphical visualization of multi-omics data.☆27Mar 16, 2022Updated 4 years ago
- R package for semi-supervised single-cell data integration☆98Jan 27, 2026Updated 2 months ago
- ☆35Jun 2, 2025Updated 10 months ago
- CellAnn☆12Nov 3, 2023Updated 2 years ago
- ☆17Jul 13, 2024Updated last year
- Code for paired TCR data analysis from TIRTL-seq experiments☆10Nov 24, 2025Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Registries for biological ontologies.☆25Apr 2, 2026Updated last week
- dandelion - A single cell BCR/TCR V(D)J-seq analysis package☆125Mar 16, 2026Updated 3 weeks ago
- python API to the CoGAPS NMF package☆19May 19, 2025Updated 10 months ago
- ☆13Jun 6, 2024Updated last year
- Survival Analysis for Protein-Level TCGA Analysis☆11Nov 30, 2018Updated 7 years ago
- Analytical Platform Shiny Server • This repository is defined and managed in Terraform☆23Apr 18, 2024Updated last year
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆33Sep 3, 2025Updated 7 months ago
- ☆13Feb 12, 2026Updated last month
- ☆41Jun 24, 2025Updated 9 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆11May 11, 2024Updated last year
- scAR (single-cell Ambient Remover) is a deep learning model for removal of the ambient signals in droplet-based single cell omics☆59Aug 17, 2024Updated last year
- Interactive visualisation of CellphoneDB results☆12Jan 15, 2025Updated last year
- An interpretable and flexible deep learning framework for single-T cell transcriptome and receptor analysis☆15Apr 5, 2025Updated last year
- BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses☆23Jul 11, 2021Updated 4 years ago
- Single-pass probabilistic duplicate marking of alignments with a Bloom filter.☆24Aug 7, 2023Updated 2 years ago
- Fast algorithms for GLM-PCA.☆14Mar 12, 2025Updated last year
- Network analyses of single cell-based digital twins for personalized treatment of inflammatory disease