Matplotlib style for scientific publications
☆14Apr 27, 2026Updated this week
Alternatives and similar repositories for mplscience
Users that are interested in mplscience are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Simple scVI implementation☆12Mar 16, 2026Updated last month
- An end-to-end computational pipeline for large Perturb-seq screens☆15Apr 25, 2025Updated last year
- Code for pmVAE model, seen in ICML CompBio '21☆12Apr 12, 2024Updated 2 years ago
- ☆26Mar 31, 2026Updated 3 weeks ago
- Seven Bridges Genomics aligner/caller debugging and analysis tools☆13Nov 20, 2018Updated 7 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Registries for biological ontologies.☆25Updated this week
- Decima is a Python library to train sequence models on single-cell RNA-seq data.☆65Mar 20, 2026Updated last month
- Code for scKINETICS (ISMB 2023)☆22Oct 23, 2023Updated 2 years ago
- A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data☆21May 24, 2021Updated 4 years ago
- Universal Single-Cell Genomics Preprocessing package☆49Feb 21, 2026Updated 2 months ago
- Code for the empty droplet and cell detection project from the HCA Hackathon.☆21Feb 26, 2019Updated 7 years ago
- Models and datasets for perturbational single-cell omics☆176Aug 19, 2022Updated 3 years ago
- Annotated sequence data☆11Feb 2, 2025Updated last year
- A python port of the R package SCTransform:☆21Jul 10, 2021Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Accelerated, Python-only, single-cell integration benchmarking metrics☆91Apr 23, 2026Updated last week
- A method for analyzing scATAC-seq experiments.☆33Jun 20, 2025Updated 10 months ago
- Polygraph evaluates and compares groups of nucleic acid sequences based on their sequence and functional content for effective design of …☆40Mar 27, 2025Updated last year
- pseudobulking on an AnnData object☆35Mar 14, 2025Updated last year
- A flexible and extensible API for annotated 2D matrix data stored in multiple underlying formats.☆84Apr 20, 2026Updated last week
- Code used to analyze single cell RNA and ATAC sequencing in developing human brain☆36Jan 4, 2022Updated 4 years ago
- Pytorch implementation of the Borzoi model from Calico, and Flashzoi, a 3x faster Borzoi enhancement.☆95Nov 13, 2025Updated 5 months ago
- ☆10Jan 19, 2019Updated 7 years ago
- scooby: Modeling multi-modal genomic profiles from DNA sequence at single-cell resolution.☆62Apr 1, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Deep probabilistic analysis of single-cell and spatial omics data☆1,607Updated this week
- Package to design primers for MutaSeq and related methods☆11Jan 15, 2021Updated 5 years ago
- ☆12Jan 31, 2023Updated 3 years ago
- Distributed single-cell data analysis.☆39Apr 15, 2026Updated 2 weeks ago
- Code to reproduce the analysis of "Decoding gene regulation in the mouse embryo using single-cell multi-omics""☆40Feb 19, 2026Updated 2 months ago
- ☆13Apr 17, 2026Updated last week
- Code for the analysis performed in the paper "Transcription factor stoichiometry, motif affinity and syntax regulate single-cell chromati…☆12Oct 16, 2025Updated 6 months ago
- Machine learning tutorial for biologists, designed for Oz Single Cells 2019☆15Jul 21, 2019Updated 6 years ago
- Store collections of experimental data based on TileDB☆12Apr 20, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆10Aug 29, 2023Updated 2 years ago
- ☆16Apr 8, 2025Updated last year
- ☆31Mar 30, 2026Updated 3 weeks ago
- Toolkit for single-cell DNA methylation analysis.☆47Mar 16, 2026Updated last month
- Transcriptional regulatory network inference from gene expression and prior information with LASSO-StARS☆15May 3, 2022Updated 3 years ago
- ☆10Dec 4, 2023Updated 2 years ago
- Taiga for Dataset management☆12Apr 21, 2026Updated last week