Single-cell Lung Cancer Atlas with 1.2M cells
☆93Jan 19, 2025Updated last year
Alternatives and similar repositories for luca
Users that are interested in luca are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code used to create the core and extended GBmap, including downstream analyses (cell-cell interactions, spatial transcriptomics deconvolu…☆65Dec 7, 2022Updated 3 years ago
- Code used to process the data of the HBCA project☆33Feb 9, 2024Updated 2 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆41Jan 6, 2021Updated 5 years ago
- ☆26Aug 24, 2023Updated 2 years ago
- This repository contains all code used for the Human Lung Cell Atlas project.☆61Aug 21, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Functions to analyze copy number aberrations in single-cell data☆13Feb 3, 2025Updated last year
- ☆17Mar 27, 2023Updated 3 years ago
- These are scripts for pan-cacner NK cells analyses.☆77Aug 18, 2023Updated 2 years ago
- ☆59Feb 23, 2024Updated 2 years ago
- ☆63Dec 27, 2023Updated 2 years ago
- ☆51Feb 16, 2022Updated 4 years ago
- ☆33Feb 26, 2025Updated last year
- ☆37Sep 20, 2022Updated 3 years ago
- A scanpy extension to analyse single-cell TCR and BCR data.☆256Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆17Sep 13, 2023Updated 2 years ago
- ☆21Nov 9, 2023Updated 2 years ago
- analysis script for GBM single cell RNA seq data☆22May 26, 2021Updated 5 years ago
- A Bayesian model for compositional single-cell data analysis☆199Jan 13, 2026Updated 5 months ago
- Benchmarking analysis of data integration tools☆423Apr 27, 2026Updated last month
- NEPAL is to calculate neuroendocrine (NE) risk score from bulk and single-cell transcriptomics of both human and mouse prostate cancer (P…☆14Apr 23, 2024Updated 2 years ago
- ☆113Sep 16, 2020Updated 5 years ago
- Tumour Heterogeneity and Intercellular Networks of Nasopharyngeal Carcinoma at Single Cell Resolution☆13Mar 1, 2023Updated 3 years ago
- Identifying tumor cells at the single-cell level using machine learning☆51Nov 10, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy.☆192Updated this week
- ☆15Sep 12, 2023Updated 2 years ago
- These are code and scripts for MVI+ HCC scRNA-seq analysis.☆19Aug 24, 2023Updated 2 years ago
- ☆15Apr 11, 2024Updated 2 years ago
- Deposited codes for snMultiome in human cortex manuscript☆13Aug 12, 2024Updated last year
- Coarse-graining of large single-cell RNA-seq data into metacells☆102Apr 16, 2026Updated last month
- ☆18Oct 13, 2023Updated 2 years ago
- Accurate and fast cell marker gene identification with COSG☆66Feb 8, 2026Updated 4 months ago
- Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.☆32Jun 19, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Metacells - Single-cell RNA Sequencing Analysis☆126Apr 20, 2026Updated last month
- scRNA-seq analysis of EENT-ONB☆22Jan 14, 2024Updated 2 years ago
- Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper☆56Jan 6, 2025Updated last year
- Code for a multimodal atlas of healthy and injured cell states and niches in the human kidney☆27Mar 7, 2024Updated 2 years ago
- A record of the analysis pipelines used to create the HTAPP data☆34Apr 15, 2025Updated last year
- Read fcs files.☆12Nov 13, 2025Updated 7 months ago
- A tool for semi-automatic cell type classification☆487May 22, 2026Updated 3 weeks ago