Flow & mass cytometry analytics.
☆61Aug 3, 2026Updated last week
Alternatives and similar repositories for pytometry
Users that are interested in pytometry are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Build contrasts for models defined with formulaic☆13Aug 3, 2026Updated last week
- Read fcs files.☆12Nov 13, 2025Updated 8 months ago
- A Python toolkit for flow cytometry analysis supporting GatingML and FlowJo workspaces☆224Mar 30, 2026Updated 4 months ago
- Optimal gating strategies for flow and mass cytometry.☆16Jul 22, 2026Updated 2 weeks ago
- A Python toolbox for quantitative, reproducible flow cytometry analysis☆223Jul 17, 2026Updated 3 weeks ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Fast array utilities☆15Updated this week
- Python package to generate high dimensional Flow Cytometry datasets using imputation by XGBoost regression☆13Sep 30, 2024Updated last year
- Shadow objects for AnnData and MuData (experimental)☆11Feb 28, 2025Updated last year
- Biology-driven deep generative model for cell-type annotation in cytometry. Scyan is an interpretable model that also corrects batch-effe…☆46Jul 8, 2026Updated last month
- A data-centric flow/mass cytometry automated analysis framework☆43Jan 22, 2025Updated last year
- Automatically annotate cell types, consistently across samples.☆27Updated this week
- A user-friendly library that brings familiar DataFrame-style operations to AnnData objects with a simple and expressive API.☆18Aug 3, 2026Updated last week
- A Python library for reading and writing Flow Cytometry Standard (FCS) files☆58Nov 5, 2025Updated 9 months ago
- ☆17Aug 3, 2026Updated last week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Genomic Features in Python from BioConductor's AnnotationHub☆23Aug 3, 2026Updated last week
- muon is a multimodal omics Python framework☆278Aug 3, 2026Updated last week
- Registries for biological ontologies.☆27Aug 3, 2026Updated last week
- Single-cell differential expression☆19Apr 23, 2026Updated 3 months ago
- Pipeline for harmonising immunological receptor–epitope interactions☆16Aug 3, 2026Updated last week
- High-Performance Sparse Matrix Library☆19Nov 23, 2025Updated 8 months ago
- FlowUtils is a Python package containing various utility functions related to flow cytometry analysis, primarily focused on compensation …☆21Nov 4, 2025Updated 9 months ago
- An interface for Nested Stochastic Block Model for single cell analysis☆39Updated this week
- GraphCompass: Graph Comparison Tools for Differential Analyses in Spatial Systems☆39Jul 11, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- GREAT algorithm in Python☆16Oct 24, 2022Updated 3 years ago
- Python package to perform enrichment analysis from omics data.☆288Aug 3, 2026Updated last week
- CZ CELLxGENE Discover Census☆129Updated this week
- Access public biological ontologies.☆14Aug 7, 2024Updated 2 years ago
- Flow cytometry analysis workflow. The aim of this project is to provide an intuitive workflow for the analysis of high-dimensionality cyt…☆28Apr 29, 2026Updated 3 months ago
- Spatial analysis toolkit for single cell multiplexed tissue data☆30Sep 2, 2024Updated last year
- Reference mapping for single-cell genomics☆407Jun 26, 2026Updated last month
- A python parser for reading fcs files supporting FCS 2.0, 3.0, 3.1☆86Nov 27, 2024Updated last year
- Fit generalized linear models in python.☆28Mar 6, 2023Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- The complete FlowSOM package known from R, now available in Python!☆34Aug 3, 2026Updated last week
- A flexible and extensible API for annotated 2D matrix data stored in multiple underlying formats.☆85Jul 24, 2026Updated 2 weeks ago
- Registry for scverse ecosystem packages☆38Updated this week
- Cookiecutter template for scverse☆89Updated this week
- Subpopulation detection in high-dimensional single-cell data☆75Oct 5, 2020Updated 5 years ago
- Multimodal Data (.h5mu) implementation for Python☆129Updated this week
- A scanpy extension to analyse single-cell TCR and BCR data.☆264Updated this week