Virus Identification
☆25May 26, 2025Updated 10 months ago
Alternatives and similar repositories for ViraLM
Users that are interested in ViraLM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Accurate identification of bacteriophages from metagenomic data using Transformer☆22Nov 6, 2024Updated last year
- Host prediction for phages☆26Nov 6, 2024Updated last year
- VirBot: a protein-based RNA virus detector for metagenomic data☆34Jul 29, 2024Updated last year
- The viral taxonomic assignment pipeline☆43Feb 5, 2026Updated 2 months ago
- a command line tool for viral proteomic tree generation, part of the ViPTree project: http://www.genome.jp/viptree☆36Sep 20, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆35Jun 26, 2025Updated 9 months ago
- An community curated awesome list of tools, software, databases and other resources for working/analysing RNA Viruses☆22Aug 15, 2025Updated 7 months ago
- Small pipeline to cluster viral genomes based on their k-mer content. WiP☆18Feb 3, 2026Updated 2 months ago
- GCN classifier for phage taxanomy classification☆32Nov 6, 2024Updated last year
- Workflow to assign Taxonomy to a bacteriophage genome isolate☆38Updated this week
- VirID: An integrated platform for the discovery and characterization of RNA Viruses☆23Jan 8, 2026Updated 3 months ago
- This is graphanalyzer.py, a script designed to automatically interpret the outputs generated by vConTACT2 when using the INPHARED databas…☆19Nov 29, 2023Updated 2 years ago
- An RNA virus strain-level identification tool for short reads.☆23Updated this week
- MetaGeneMark-2: Improved Gene Prediction in Metagenomes☆23Mar 20, 2026Updated 3 weeks ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Scripts, HMMs and search databases for identifying and classifying viral RdRp sequences☆11Jul 4, 2025Updated 9 months ago
- ☆23May 13, 2024Updated last year
- ☆34Oct 6, 2025Updated 6 months ago
- ☆20Sep 26, 2025Updated 6 months ago
- Local version of the virus identification and analysis web server (tool set)☆103Mar 31, 2026Updated last week
- Detection of NCLDV signatures in 'omic data☆35Dec 28, 2025Updated 3 months ago
- Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.☆80Apr 16, 2025Updated 11 months ago
- Identifying viruses from metagenomic data by deep learning☆150Jun 1, 2025Updated 10 months ago
- PhaTYP: Predicting lifestyle for bacteriophages using BERT☆16Nov 6, 2024Updated last year
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- Model for taxonomy classification☆16May 28, 2021Updated 4 years ago
- Multi-Teacher Distillation for Protein embedding☆12May 31, 2024Updated last year
- viralVerify: viral contig verification tool☆74Feb 19, 2026Updated last month
- Exploring the "dusk matter" of the RNA virosphere☆37Mar 25, 2022Updated 4 years ago
- GDmicro - Use GCN and Deep adaptation network to classify host disease status based on human gut microbiome data.☆11Mar 22, 2024Updated 2 years ago
- This is a deep learning method for identification of viral contigs with short length from metagenomic data.☆10Dec 20, 2021Updated 4 years ago
- Phage virion protein classifier☆14Nov 6, 2024Updated last year
- Binning Virus Genomes from Metagenomes☆72Jul 13, 2022Updated 3 years ago
- ☆20Dec 4, 2025Updated 4 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Fast and sensitive discovery of complete phages and prophages in bacterial genome sequences☆22Dec 16, 2024Updated last year
- Discover and annotate the virome☆60Feb 11, 2026Updated 2 months ago
- Phage Annotation using Protein Structures☆156Updated this week
- ☆33Apr 15, 2024Updated last year
- Phage annotations and predictions. A spae is a prediction or foretelling. We'll foretell you what your phage is doing!☆42Feb 26, 2026Updated last month
- 🦠🧬 Unraveling Viral Genomes from Metagenomes☆10Oct 3, 2025Updated 6 months ago
- ViralCC: leveraging metagenomic proximity-ligation to retrieve complete viral genomes☆18Feb 3, 2026Updated 2 months ago